Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is pstD
Identifier: 15673701
GI number: 15673701
Start: 1773792
End: 1774715
Strand: Reverse
Name: pstD
Synonym: L157144
Alternate gene names: 15673701
Gene position: 1774715-1773792 (Counterclockwise)
Preceding gene: 15673702
Following gene: 15673700
Centisome position: 75.02
GC content: 39.61
Gene sequence:
>924_bases ATGGAAAATTCAAAAATCAAAGAAAAATTGCTTTCAAGCAATAAAAATTCAAGACTTGAAAAATTTGGTAAGAGTTTAAC TTTCTTATGTATTGCCCTTATTGTCTTCGTTGTAGGTGCAATTCTTGTCTTTGTTGCTCAAAAAGGTCTGTCAACTTTCT ATTCAGATGGTGTTAATCCTTTCCGTTTCCTTTTTGGAACAAATTGGTCACCAGGTAATCTTGGCCCTGACGGTAAACCC GCAGTTGGCGCATTGCCGATGTTTACGGGGTCATTGATTGTTACTGTACTTTCAGCCCTTGTTGCCACTCCATTTGCGAT TGGTGCGGGAATTTATATGACAGAAATTTCACCAAAATATGGTAAGAAAATTTTGCAACCTGTCATTGAACTTCTTGTTG GTATTCCTTCAGTTGTTTATGGCTTCATTGGTTTGACTGTTGTTGTTCCAGCCATTCGTAATGTTTTTGGTGGAACTGGT TTGGGTCTCTTGTCAGGTGTGTTTGTACTCTTTGTCATGATTTTACCAACTGTAACCTCAATGACTGTGGATGCTATGAA AGCTGTCCCTTCTTATTATAAAGAAGCGTCACTCGGACTTGGTGCAACGCGTTGGCAAACAATTTGGCGTGTTCTTCTAA GAGCCGCAACACCAGGGATTTTGACCGCTGTTATCTTTGGAATGGCGCGTGCTTTTGGTGAAGCTCTTGCTATTCAAATG GTGGTAGGTAATGCTGTAATGATGCCAAAAGATTTGATTTCACCAGCTTCAACCTTGACTTCAATCTTGACATCAGGAAT TCCAAATGCAACACCTGGTATTCAATTGAATGCACTTTGGTCACTTGCCTTACTCCTTTTGATTATGTCACTCTTTTTCA ACCTCGCAATGCGTGCTATTGCTAAGAAAGGAAGTCTTAAATAA
Upstream 100 bases:
>100_bases TATCCTCCGTCAGTAAAAAAATTAGTCAAAATAAGTTTAATCAATAACTTCATTTGCATTAATCAGATAGATGCAAATTA ACAAAAATAGTTAGGTCCCT
Downstream 100 bases:
>100_bases TGAACGCTAAACGCTCTGACAAGATTGCCACTGGTGTCCTTTACGTCCTTTCTGGCATCATTGTTCTTATCCTCGCTTTT TTACTGGCTTATATTTTAAT
Product: phosphate ABC transporter permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP AVGALPMFTGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK
Sequences:
>Translated_307_residues MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP AVGALPMFTGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK >Mature_307_residues MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNPFRFLFGTNWSPGNLGPDGKP AVGALPMFTGSLIVTVLSALVATPFAIGAGIYMTEISPKYGKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTG LGLLSGVFVLFVMILPTVTSMTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAIAKKGSLK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=250, Percent_Identity=29.2, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790163, Length=175, Percent_Identity=28, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32550; Mature: 32550
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNP CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FRFLFGTNWSPGNLGPDGKPAVGALPMFTGSLIVTVLSALVATPFAIGAGIYMTEISPKY HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHH GKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTGLGLLSGVFVLFVMILPTVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAI HHCCHHHCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKKGSLK HHCCCCC >Mature Secondary Structure MENSKIKEKLLSSNKNSRLEKFGKSLTFLCIALIVFVVGAILVFVAQKGLSTFYSDGVNP CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FRFLFGTNWSPGNLGPDGKPAVGALPMFTGSLIVTVLSALVATPFAIGAGIYMTEISPKY HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHH GKKILQPVIELLVGIPSVVYGFIGLTVVVPAIRNVFGGTGLGLLSGVFVLFVMILPTVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MTVDAMKAVPSYYKEASLGLGATRWQTIWRVLLRAATPGILTAVIFGMARAFGEALAIQM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VVGNAVMMPKDLISPASTLTSILTSGIPNATPGIQLNALWSLALLLLIMSLFFNLAMRAI HHCCHHHCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKKGSLK HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]