Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yqcC
Identifier: 15673564
GI number: 15673564
Start: 1626154
End: 1626585
Strand: Reverse
Name: yqcC
Synonym: L25903
Alternate gene names: NA
Gene position: 1626585-1626154 (Counterclockwise)
Preceding gene: 15673565
Following gene: 15673563
Centisome position: 68.76
GC content: 40.28
Gene sequence:
>432_bases ATGACACGTCCTAATTATGTTCAAGTTACTGATACACGCGGAACCTGGGATGGATGGACCTTGACTGTTGCAGAATCCGA TCAATTTCAAAATACTTCAGGAGAAAAGCTAACCGGAGCAGAACTATCTTTTAGTAAAGGTTATACCGATGGAACCACTG CTGCAAAACCCGGTTATATCAATAACACTAATTTTGTTGTTAGTACAGCTGCTAGCAAAATTTTAGGAGCAGGTCCAAAT CAAGGGATGGGAACTTGGGTATATGGTCTAGGAGCTAATGCAGATTACCAAGAAAATGGTGGAGCGCATCTGGGTAATGA AGCAGTTTCTACAGCATCACCAATCACTCTTAAAGTTATTGCTGGTACAAATAAAGCGACGTCATATACGACACAATTAA TTTGGTCCTTAACGAATACCCCAGGAAATTAA
Upstream 100 bases:
>100_bases AAGTCTAAGTTTTGGAACACAAAAAATTTCTTCAAAGGATGCCACATACTTTGCTCATGCACAATGGATTAGCAAAGATA AAGATGGAAGTGCAGTTGAT
Downstream 100 bases:
>100_bases ATGTTTATAATTTCTAAACTATGAAAAGGAGGGTACTGTGAAAAAAATAAGATGGTTAAGTATACCTCTCATCTTAATGA CATTAGGATTGGAATTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: WxL Domain-Containing Cell Surface Protein; Secreted Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTRPNYVQVTDTRGTWDGWTLTVAESDQFQNTSGEKLTGAELSFSKGYTDGTTAAKPGYINNTNFVVSTAASKILGAGPN QGMGTWVYGLGANADYQENGGAHLGNEAVSTASPITLKVIAGTNKATSYTTQLIWSLTNTPGN
Sequences:
>Translated_143_residues MTRPNYVQVTDTRGTWDGWTLTVAESDQFQNTSGEKLTGAELSFSKGYTDGTTAAKPGYINNTNFVVSTAASKILGAGPN QGMGTWVYGLGANADYQENGGAHLGNEAVSTASPITLKVIAGTNKATSYTTQLIWSLTNTPGN >Mature_142_residues TRPNYVQVTDTRGTWDGWTLTVAESDQFQNTSGEKLTGAELSFSKGYTDGTTAAKPGYINNTNFVVSTAASKILGAGPNQ GMGTWVYGLGANADYQENGGAHLGNEAVSTASPITLKVIAGTNKATSYTTQLIWSLTNTPGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15004; Mature: 14872
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPNYVQVTDTRGTWDGWTLTVAESDQFQNTSGEKLTGAELSFSKGYTDGTTAAKPGYI CCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEE NNTNFVVSTAASKILGAGPNQGMGTWVYGLGANADYQENGGAHLGNEAVSTASPITLKVI CCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AGTNKATSYTTQLIWSLTNTPGN ECCCCCCCEEEEEEEEECCCCCC >Mature Secondary Structure TRPNYVQVTDTRGTWDGWTLTVAESDQFQNTSGEKLTGAELSFSKGYTDGTTAAKPGYI CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEE NNTNFVVSTAASKILGAGPNQGMGTWVYGLGANADYQENGGAHLGNEAVSTASPITLKVI CCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AGTNKATSYTTQLIWSLTNTPGN ECCCCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA