Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yqcB
Identifier: 15673563
GI number: 15673563
Start: 1625358
End: 1626116
Strand: Reverse
Name: yqcB
Synonym: L25107
Alternate gene names: NA
Gene position: 1626116-1625358 (Counterclockwise)
Preceding gene: 15673564
Following gene: 15673562
Centisome position: 68.74
GC content: 38.21
Gene sequence:
>759_bases GTGAAAAAAATAAGATGGTTAAGTATACCTCTCATCTTAATGACATTAGGATTGGAATTTCGAGTTAATGCAGCAGAAGT CCAAAGCTATAATTCGCAAGGAATAGTTGGTTTTGGTCCAGGTAGCGGAGTTCAACCCCCTGTTAATCCTAACAAACCTG ATCCAACTTTACCTGTATTTCCACAAAATCCAGATGGTTCAAAGCCTAATCCAGGGGGAAATGGCTCACTGACAATTGAT TTTGCTTCAAGTTTTGACTTTGGGAATCATAAAATTTCTAATAAAGATCAAACATATTTAGCTAAAGCCCAAAAGTATTT TGATTCTGAAGTTTTAACACCGAATTATGTTCAAGTAACCGATCGTCGAGGAACATTTGCCGGTTGGAACTTAAAAGTAG TCGAAAAGACACAAGTTACTCAAATTGACTCAGGCCCTCAGAAGTACAAAGTACTTAAAGGAGCAACGATTAATTTAAAA AGTTCAGAAACAGCTTCTTTTACTAATGAAAAATCTCCCAAAACACAAACAATTTCGGGACTTATTCCCGGTGTTGAAAC TCAAGTAGCTCTTGCCTCAACTGGCGAAGGAGCTGGAACTTGGGTAATTCGCTGGGGAAACGATTCAATGGTCACTGAAG ATGGCTTAACAACAGCAGTTTCATTATTTGTTCCTGGAGATACCCCCAAGGATGCAACTGCTTACACTACAACTTTAAAT TGGATATTGTCTGGTTTACCGACAAACGTGCCAAATTAA
Upstream 100 bases:
>100_bases AATAAAGCGACGTCATATACGACACAATTAATTTGGTCCTTAACGAATACCCCAGGAAATTAAATGTTTATAATTTCTAA ACTATGAAAAGGAGGGTACT
Downstream 100 bases:
>100_bases TTTGTAACACACATTATTATAGAAAAGAGGACATTATATGTCTAAATCAGTAACAAAATATCTCTCTCTAGCAACTTTAG GGCTATTAGCAGTATCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; WxL Domain-Containing Cell Surface Protein
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKKIRWLSIPLILMTLGLEFRVNAAEVQSYNSQGIVGFGPGSGVQPPVNPNKPDPTLPVFPQNPDGSKPNPGGNGSLTID FASSFDFGNHKISNKDQTYLAKAQKYFDSEVLTPNYVQVTDRRGTFAGWNLKVVEKTQVTQIDSGPQKYKVLKGATINLK SSETASFTNEKSPKTQTISGLIPGVETQVALASTGEGAGTWVIRWGNDSMVTEDGLTTAVSLFVPGDTPKDATAYTTTLN WILSGLPTNVPN
Sequences:
>Translated_252_residues MKKIRWLSIPLILMTLGLEFRVNAAEVQSYNSQGIVGFGPGSGVQPPVNPNKPDPTLPVFPQNPDGSKPNPGGNGSLTID FASSFDFGNHKISNKDQTYLAKAQKYFDSEVLTPNYVQVTDRRGTFAGWNLKVVEKTQVTQIDSGPQKYKVLKGATINLK SSETASFTNEKSPKTQTISGLIPGVETQVALASTGEGAGTWVIRWGNDSMVTEDGLTTAVSLFVPGDTPKDATAYTTTLN WILSGLPTNVPN >Mature_252_residues MKKIRWLSIPLILMTLGLEFRVNAAEVQSYNSQGIVGFGPGSGVQPPVNPNKPDPTLPVFPQNPDGSKPNPGGNGSLTID FASSFDFGNHKISNKDQTYLAKAQKYFDSEVLTPNYVQVTDRRGTFAGWNLKVVEKTQVTQIDSGPQKYKVLKGATINLK SSETASFTNEKSPKTQTISGLIPGVETQVALASTGEGAGTWVIRWGNDSMVTEDGLTTAVSLFVPGDTPKDATAYTTTLN WILSGLPTNVPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27079; Mature: 27079
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRWLSIPLILMTLGLEFRVNAAEVQSYNSQGIVGFGPGSGVQPPVNPNKPDPTLPVF CCCEEEEHHHHHHHHCCCEEEECHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEC PQNPDGSKPNPGGNGSLTIDFASSFDFGNHKISNKDQTYLAKAQKYFDSEVLTPNYVQVT CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEE DRRGTFAGWNLKVVEKTQVTQIDSGPQKYKVLKGATINLKSSETASFTNEKSPKTQTISG CCCCCCCCCEEEEEECEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCEEEHHH LIPGVETQVALASTGEGAGTWVIRWGNDSMVTEDGLTTAVSLFVPGDTPKDATAYTTTLN CCCCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEEHHHHH WILSGLPTNVPN HHHHCCCCCCCC >Mature Secondary Structure MKKIRWLSIPLILMTLGLEFRVNAAEVQSYNSQGIVGFGPGSGVQPPVNPNKPDPTLPVF CCCEEEEHHHHHHHHCCCEEEECHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEC PQNPDGSKPNPGGNGSLTIDFASSFDFGNHKISNKDQTYLAKAQKYFDSEVLTPNYVQVT CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEE DRRGTFAGWNLKVVEKTQVTQIDSGPQKYKVLKGATINLKSSETASFTNEKSPKTQTISG CCCCCCCCCEEEEEECEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCEEEHHH LIPGVETQVALASTGEGAGTWVIRWGNDSMVTEDGLTTAVSLFVPGDTPKDATAYTTTLN CCCCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEEHHHHH WILSGLPTNVPN HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA