Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ptbA
Identifier: 15673442
GI number: 15673442
Start: 1490930
End: 1492840
Strand: Reverse
Name: ptbA
Synonym: L90678
Alternate gene names: 15673442
Gene position: 1492840-1490930 (Counterclockwise)
Preceding gene: 15673443
Following gene: 15673441
Centisome position: 63.11
GC content: 38.15
Gene sequence:
>1911_bases ATGGGCAAATATGAAGCTCTTGCAAAAGACATTGTAGCAAATGTAGGTGGCAAAGAAAATGTCATCTCAGTGATTAACTG TATTACACGGTTACGTTTTAAACTCAGAGATGAGAAAAAAGCAAATACCGATGTCCTGAAAAATATGGATGGTGTAGTTA CAGTAATGCAATCTGGCGGCCAATACCAAGTCGTTATTGGGAATCATGTACCAGAAGTGCGTGCAGATGTAGATGCTGTC CTTGGGGTACTTGATACCTCACCAGCAGACTCTACACAAAAAGGAAACCTTTTCGATCAATTTGTGGAATTGATCTCAGG AATTTTCCAACCAATATTAGCTCCATTAGCAGCAGCGGGTATGATTAAAGGGGTTAATGCAATTTTATCCTTTGCCTTGG GACAAAGTTTTCAAGCGTCTGCAACCTATGCTGTTTTTAATGCAATGGGTGATGGTCTATTTCTCTTCCTACCAATTTTC ATTGGATATACTTCAATGAAAAAATTTAATGGTTCACCATTTGTTGGAATGATGATTGCCGCAGCACTTGTTTACCCAGG TTTCGTAGACGGAACAGTTGCAAAAACATTTGCAGAAAGTGGCGGATTAAGCCTCTTTGGAATTCCTTTTTCAGTACCAA CTGCTGGCTACGGGTCTTCTGTAATGCCAATTATTGCCATTACAGCATTTGCAGCATTTTTAGAACACCAGTTAAAGAAA ATTATTCCTGATGTAGTAAAGCTTTTCTTGACACCATTCTTTACGGCAATCATCTCAATTCCTCTAGGCTTCCTAGTTAT TGGACCAGTAATGAATCTTGCTTCAGATGCTTTAGGCAAAGGTTTACTAGCATTACAAGGATTTAATCCTATTATCTTTG GTTTAGTGCTAGGATTTGCTTGGCAAGTCTTAGTCATGTTTGGACTACATTGGGCAATTGTTCCATTTGCAATTATCGCA TTAGCAAAAGGAGAACCAACCGCGCTTTTAATTGCCGCAAGTGTTGCATCGTTTGCGCAAACTGGAGCTGTTGGAGCAGT GATGCTAAAAACAAAAGATAAACGACTTCGTGAATTAGCAATACCAGCCTTTATTTCTGGTTGGTTTGGTGTTACAGAAC CAGCAATTTACGGAATTACCCTCCCTAAGAAACGTCCATTTTGGGTTTCATGTATCGTAAGTGGAATTTTATCAGCTGTT GCCATGGCCTTGGGAATTAAAGCCTACACAATGGGAGCTTTGGGAATCTTCAGTTTTACATCTAATATTACCCTTACAGG TGAAGTTTCAGGCGCGATTAAAATTATGATTGTATCAGCTGTAGCAGTTATAGCAGGCTTTGTAGTAACCTATCTTGTGG GATTTGAAGATGATGTTATTGAAAATCCAATCCCTGACAAAAAATTTAATAAACAAAAAACGAATAAAGAAATAATTGGA AGCCCTCTTGAAGGAAAAGTTATTCCACTATCACAAGTTAAAGATGCAGCCTTTTCTGCAGGTGTAATGGGCAAAGGAGC AGCGATTGAACCAACACTAGGTGAGGTTCGTGCTCCATTTGATGGAATGGTTATGATTTTGTTCCCAACTAAACATGCAG TAGGTTTAATTTCAAATGAGGGAACTGAACTTCTCATTCATATCGGAATAGATACTGTCCAACTTGAAGGAAAATACTTT GAAACCTTTGTAAAACAAGGACAGAGTGTAAAAAAAGGTGACTTACTCCTCAAGTTTGATATTGAGCGTATTCAAAATGC GGGATACAGTACTCAAGTTCCAATCATTGTAACAAATACTCAGGATTATATGGACATTTTAGTTACAAATCAATCGACGA TTCATCAAAATGAAGTGTTACTAACTGCAGTTAATGCACAAACAACTGAATTAGTGGCAAATCCAGTTTAA
Upstream 100 bases:
>100_bases TTTTTAAGATGACTTTAGTCATCATCAACTATGGTAACAATTGGATCGTGACATTAAGTTGGCGAAACCTCTAAAAAATA TATTATTTTGGAGGTTTGTA
Downstream 100 bases:
>100_bases AATAGCATTGATGAAAAACTTTAAAAATTAGATAGGAAAATTATAAAATGACATTTAAAACAGACTTTTTATGGGGTGGA GCAACGGCAGCAAATCAATT
Product: beta-glucoside-specific PTS system IIABC component
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MGKYEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGGQYQVVIGNHVPEVRADVDAV LGVLDTSPADSTQKGNLFDQFVELISGIFQPILAPLAAAGMIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIF IGYTSMKKFNGSPFVGMMIAAALVYPGFVDGTVAKTFAESGGLSLFGIPFSVPTAGYGSSVMPIIAITAFAAFLEHQLKK IIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNPIIFGLVLGFAWQVLVMFGLHWAIVPFAIIA LAKGEPTALLIAASVASFAQTGAVGAVMLKTKDKRLRELAIPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAV AMALGIKAYTMGALGIFSFTSNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGFEDDVIENPIPDKKFNKQKTNKEIIG SPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDGMVMILFPTKHAVGLISNEGTELLIHIGIDTVQLEGKYF ETFVKQGQSVKKGDLLLKFDIERIQNAGYSTQVPIIVTNTQDYMDILVTNQSTIHQNEVLLTAVNAQTTELVANPV
Sequences:
>Translated_636_residues MGKYEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGGQYQVVIGNHVPEVRADVDAV LGVLDTSPADSTQKGNLFDQFVELISGIFQPILAPLAAAGMIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIF IGYTSMKKFNGSPFVGMMIAAALVYPGFVDGTVAKTFAESGGLSLFGIPFSVPTAGYGSSVMPIIAITAFAAFLEHQLKK IIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNPIIFGLVLGFAWQVLVMFGLHWAIVPFAIIA LAKGEPTALLIAASVASFAQTGAVGAVMLKTKDKRLRELAIPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAV AMALGIKAYTMGALGIFSFTSNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGFEDDVIENPIPDKKFNKQKTNKEIIG SPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDGMVMILFPTKHAVGLISNEGTELLIHIGIDTVQLEGKYF ETFVKQGQSVKKGDLLLKFDIERIQNAGYSTQVPIIVTNTQDYMDILVTNQSTIHQNEVLLTAVNAQTTELVANPV >Mature_635_residues GKYEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGGQYQVVIGNHVPEVRADVDAVL GVLDTSPADSTQKGNLFDQFVELISGIFQPILAPLAAAGMIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIFI GYTSMKKFNGSPFVGMMIAAALVYPGFVDGTVAKTFAESGGLSLFGIPFSVPTAGYGSSVMPIIAITAFAAFLEHQLKKI IPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNPIIFGLVLGFAWQVLVMFGLHWAIVPFAIIAL AKGEPTALLIAASVASFAQTGAVGAVMLKTKDKRLRELAIPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAVA MALGIKAYTMGALGIFSFTSNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGFEDDVIENPIPDKKFNKQKTNKEIIGS PLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDGMVMILFPTKHAVGLISNEGTELLIHIGIDTVQLEGKYFE TFVKQGQSVKKGDLLLKFDIERIQNAGYSTQVPIIVTNTQDYMDILVTNQSTIHQNEVLLTAVNAQTTELVANPV
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=632, Percent_Identity=38.9240506329114, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI48994906, Length=467, Percent_Identity=29.9785867237687, Blast_Score=196, Evalue=5e-51, Organism=Escherichia coli, GI2367362, Length=419, Percent_Identity=29.3556085918854, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1788769, Length=479, Percent_Identity=27.348643006263, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1788757, Length=138, Percent_Identity=34.7826086956522, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786894, Length=134, Percent_Identity=35.8208955223881, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67631; Mature: 67500
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1 ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGG CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHEECCC QYQVVIGNHVPEVRADVDAVLGVLDTSPADSTQKGNLFDQFVELISGIFQPILAPLAAAG EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIFIGYTSMKKFNGSPFVGMMIA HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AALVYPGFVDGTVAKTFAESGGLSLFGIPFSVPTAGYGSSVMPIIAITAFAAFLEHQLKK HHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNPIIFGLVLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH WQVLVMFGLHWAIVPFAIIALAKGEPTALLIAASVASFAQTGAVGAVMLKTKDKRLRELA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHH IPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAVAMALGIKAYTMGALGIFSFT HHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGFEDDVIENPIPDKKFNKQKTNKEIIG CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHCCHHHCC SPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDGMVMILFPTKHAVGLISNE CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCC GTELLIHIGIDTVQLEGKYFETFVKQGQSVKKGDLLLKFDIERIQNAGYSTQVPIIVTNT CCEEEEEECCEEEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCEECCEEEECC QDYMDILVTNQSTIHQNEVLLTAVNAQTTELVANPV CCCEEEEEECCCCCCCCCEEEEEECCCHHHHHCCCC >Mature Secondary Structure GKYEALAKDIVANVGGKENVISVINCITRLRFKLRDEKKANTDVLKNMDGVVTVMQSGG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHEECCC QYQVVIGNHVPEVRADVDAVLGVLDTSPADSTQKGNLFDQFVELISGIFQPILAPLAAAG EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MIKGVNAILSFALGQSFQASATYAVFNAMGDGLFLFLPIFIGYTSMKKFNGSPFVGMMIA HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AALVYPGFVDGTVAKTFAESGGLSLFGIPFSVPTAGYGSSVMPIIAITAFAAFLEHQLKK HHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IIPDVVKLFLTPFFTAIISIPLGFLVIGPVMNLASDALGKGLLALQGFNPIIFGLVLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH WQVLVMFGLHWAIVPFAIIALAKGEPTALLIAASVASFAQTGAVGAVMLKTKDKRLRELA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHH IPAFISGWFGVTEPAIYGITLPKKRPFWVSCIVSGILSAVAMALGIKAYTMGALGIFSFT HHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SNITLTGEVSGAIKIMIVSAVAVIAGFVVTYLVGFEDDVIENPIPDKKFNKQKTNKEIIG CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHCCHHHCC SPLEGKVIPLSQVKDAAFSAGVMGKGAAIEPTLGEVRAPFDGMVMILFPTKHAVGLISNE CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCC GTELLIHIGIDTVQLEGKYFETFVKQGQSVKKGDLLLKFDIERIQNAGYSTQVPIIVTNT CCEEEEEECCEEEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCEECCEEEECC QDYMDILVTNQSTIHQNEVLLTAVNAQTTELVANPV CCCEEEEEECCCCCCCCCEEEEEECCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]