Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is aroH
Identifier: 15673235
GI number: 15673235
Start: 1280370
End: 1281392
Strand: Reverse
Name: aroH
Synonym: L0064
Alternate gene names: 15673235
Gene position: 1281392-1280370 (Counterclockwise)
Preceding gene: 15673236
Following gene: 15673234
Centisome position: 54.17
GC content: 35.19
Gene sequence:
>1023_bases ATGACTTTTAAAGAACTCAGTAACAAAATTAACATTAAAGATGTAAGAGAGCTAAATCATTTAAATGATGAGCAACAAGA AAAGAAAGAAAAACGTGATAAGGAACTTGAAGCGATAATTAAGGGTGAAGACGATAGAATCCTCTTAGTCATTGGCCCCT GCTCATCGGATAATGAAGCTGCAGTTCTAGAATATGCTCACAGATTGTTAAAACTTCAAAAAGAAGTAGAAGATAAAATT TTTATTGTGATGCGTGTTTATACTGCAAAACCGCGGACAAACGGAGATGGCTATAAAGGCCTCATTCACGAACCTGATGC AGATGGACATACAGACCTTATCAATGGGATAAAAATGGTTCGTGACCTTCACTATAAAGTAATTACTGAAACTGGTCTGA CTACAGCAGATGAGATGCTATACCCAGAAAATCTACCATTAGTTGATGACTTAGTAAGTTACTATGCAGTTGGCGCTCGC TCAGTTGAAAATCAACAACATCGCTTTGTTGCCTCAGGAATAGATGCCCCAACAGGAATGAAAAACCCGACATCAGGGAA TTTAAAAGTTATGTTTAATGGAATGTATGCAGCCCAACAATCTCAAGATTTTCTATTTGGGAATGCTGAAGTAGAAACAT CAGGAAATCCATTAGCTCATGCCATCCTTCGTGGTGGACAAGATGAAAATGGTAAAAACCATCCAAATTACTATACAGAT AATCTTCTTGAAAGTATCGAAATATACGAAAAAATGGGTTTACAAAATCCATTTATTGTTATTGATACTAATCATGATAA CTCTGGGAAGAAGTATATGGAACAAATAAGAATTGTTCGTCAAACATTAGTCAATCGTAATTGGGATGAACAAATTCATA AATATGTCAGAGGATTTATGATTGAATCATATCTTGAAGACGGTCGTCAAGACAAACCAGAAGTATTTGGAAAATCAATC ACTGACCCATGTTTGGGTTGGGATAAAACAGAAGAACTTATTAATGAAATTTATAATTCGTGA
Upstream 100 bases:
>100_bases ATTATAAAGGAGGCACATAAAAAGTAAAATAGAAAAAATTTATTGCAAGTAAAATATTATTAAGTATTTTTACTAAAAAA CTATAGAAAAAAGGTAAAAG
Downstream 100 bases:
>100_bases TTGTAAAATGAGAAGGGATGAGTGAGAAACTTAATAGATTATTTTCATATTCTGTTCAAATAGAAAATAAATTTTTCTAT CAAAAGTAAAGAACCAAACC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTFKELSNKINIKDVRELNHLNDEQQEKKEKRDKELEAIIKGEDDRILLVIGPCSSDNEAAVLEYAHRLLKLQKEVEDKI FIVMRVYTAKPRTNGDGYKGLIHEPDADGHTDLINGIKMVRDLHYKVITETGLTTADEMLYPENLPLVDDLVSYYAVGAR SVENQQHRFVASGIDAPTGMKNPTSGNLKVMFNGMYAAQQSQDFLFGNAEVETSGNPLAHAILRGGQDENGKNHPNYYTD NLLESIEIYEKMGLQNPFIVIDTNHDNSGKKYMEQIRIVRQTLVNRNWDEQIHKYVRGFMIESYLEDGRQDKPEVFGKSI TDPCLGWDKTEELINEIYNS
Sequences:
>Translated_340_residues MTFKELSNKINIKDVRELNHLNDEQQEKKEKRDKELEAIIKGEDDRILLVIGPCSSDNEAAVLEYAHRLLKLQKEVEDKI FIVMRVYTAKPRTNGDGYKGLIHEPDADGHTDLINGIKMVRDLHYKVITETGLTTADEMLYPENLPLVDDLVSYYAVGAR SVENQQHRFVASGIDAPTGMKNPTSGNLKVMFNGMYAAQQSQDFLFGNAEVETSGNPLAHAILRGGQDENGKNHPNYYTD NLLESIEIYEKMGLQNPFIVIDTNHDNSGKKYMEQIRIVRQTLVNRNWDEQIHKYVRGFMIESYLEDGRQDKPEVFGKSI TDPCLGWDKTEELINEIYNS >Mature_339_residues TFKELSNKINIKDVRELNHLNDEQQEKKEKRDKELEAIIKGEDDRILLVIGPCSSDNEAAVLEYAHRLLKLQKEVEDKIF IVMRVYTAKPRTNGDGYKGLIHEPDADGHTDLINGIKMVRDLHYKVITETGLTTADEMLYPENLPLVDDLVSYYAVGARS VENQQHRFVASGIDAPTGMKNPTSGNLKVMFNGMYAAQQSQDFLFGNAEVETSGNPLAHAILRGGQDENGKNHPNYYTDN LLESIEIYEKMGLQNPFIVIDTNHDNSGKKYMEQIRIVRQTLVNRNWDEQIHKYVRGFMIESYLEDGRQDKPEVFGKSIT DPCLGWDKTEELINEIYNS
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=319, Percent_Identity=40.1253918495298, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI1788953, Length=328, Percent_Identity=37.8048780487805, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI1787996, Length=317, Percent_Identity=36.9085173501577, Blast_Score=204, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320240, Length=311, Percent_Identity=35.6913183279743, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319726, Length=325, Percent_Identity=36, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38843; Mature: 38712
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKELSNKINIKDVRELNHLNDEQQEKKEKRDKELEAIIKGEDDRILLVIGPCSSDNEA CCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCH AVLEYAHRLLKLQKEVEDKIFIVMRVYTAKPRTNGDGYKGLIHEPDADGHTDLINGIKMV HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RDLHYKVITETGLTTADEMLYPENLPLVDDLVSYYAVGARSVENQQHRFVASGIDAPTGM HHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KNPTSGNLKVMFNGMYAAQQSQDFLFGNAEVETSGNPLAHAILRGGQDENGKNHPNYYTD CCCCCCCEEEEEECHHHHCCCCCEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHH NLLESIEIYEKMGLQNPFIVIDTNHDNSGKKYMEQIRIVRQTLVNRNWDEQIHKYVRGFM HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IESYLEDGRQDKPEVFGKSITDPCLGWDKTEELINEIYNS HHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TFKELSNKINIKDVRELNHLNDEQQEKKEKRDKELEAIIKGEDDRILLVIGPCSSDNEA CHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCH AVLEYAHRLLKLQKEVEDKIFIVMRVYTAKPRTNGDGYKGLIHEPDADGHTDLINGIKMV HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RDLHYKVITETGLTTADEMLYPENLPLVDDLVSYYAVGARSVENQQHRFVASGIDAPTGM HHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KNPTSGNLKVMFNGMYAAQQSQDFLFGNAEVETSGNPLAHAILRGGQDENGKNHPNYYTD CCCCCCCEEEEEECHHHHCCCCCEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHH NLLESIEIYEKMGLQNPFIVIDTNHDNSGKKYMEQIRIVRQTLVNRNWDEQIHKYVRGFM HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IESYLEDGRQDKPEVFGKSITDPCLGWDKTEELINEIYNS HHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9422601 [H]