Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is cobQ
Identifier: 15673087
GI number: 15673087
Start: 1114170
End: 1114955
Strand: Reverse
Name: cobQ
Synonym: L113931
Alternate gene names: NA
Gene position: 1114955-1114170 (Counterclockwise)
Preceding gene: 15673088
Following gene: 15673081
Centisome position: 47.13
GC content: 35.62
Gene sequence:
>786_bases ATGGCTTATATCTCTTTAAAATCAAATCTTGAAAATCCAAAGTATTCCCTCAACGTGGCTCATCTTTATGGTGATTTAAT GAATACTTATGGTGATAATGGAAATATTCTCATGCTCAAGTATGTCGGAGAAAAATTAGGGGCAGAGATGACCTTCAATA TCGTTTCTTTAGGTGATACTTTTGCAAAAGAAGATTATGACCTTGTTTTCTGGGGTGGTGGTCAAGATTATGAGCAAGAA ATTATTGCAGATCAATCATTGATTGACTTGTCAGCACCTTTAAAAGATTACATTGAATCTGAAAAACCACTTCTTGCAAT TTGCGGTGGTTATCAAATGCTCGGTCAGTACTATGTTAATTCCGAAGGGACAAAAATTCAAGGAACGGGAATTCTTGGAC ATTATACTGAAAATTTACGAACTGACCGTTTTATTGGTGATATTGAAACTCACAATGAAGAATTTGGTGAAACATATTAT GGTTTTGAAAACCATTCAGGAATTACCTATCTGTCTGATGACGAAAAGCCACTAGGAACCGTCGTTTACGGTGGTGGAAA TAATCCAGATGACCAAACCGAAGGTTTAATTTACAAAAATACTTTTGGAACTTATTTCCATGGGCCAATTCTTTCAAGAA ATGCACGACTAGCTTATCGTTTGGTGACTACTGCTCTTTACCAAAAATATGGAGAAGAAATTCAACTCCCTGCTTTTGAA GAGATTTTAGCTGACGAAGATAAAGGCCAACAAATTGGTGACCTCAAACGTAAAGTTGAAAAATAA
Upstream 100 bases:
>100_bases TCCAAAAGAGCATGTTTATATTTTGGCAACTTACACTGCCATGTTACAAATGCGTGAATTATTGGCTGAGGGTCATTATC TTGGAAAGGAAATGCGTTAA
Downstream 100 bases:
>100_bases TAAAAAAATTACTGATGAAATTTCTGTCAGTAATTTTTTTATTTCTTAAAAAGCTGTCAGTAAAAATATTAATGATTAAT CTACTGATTTCAAAGCCCCA
Product: cobyric acid synthase
Products: NA
Alternate protein names: Cobyric Acid Synthase; CobB/CobQ Domain Protein Glutamine Amidotransferase; Cobyric Acid Synthase CobQ; CobB/CobQ-Like Glutamine Amidotransferase; Adenosylcobyric Acid Synthase; CobB/CobQ-Like Glutamine Amidotransferase Domain Protein; Glutamine Amidotransferase CobB/CobQ Family; Amidotransferase; CobB/CobQ-Like Protein; Cobb/Cobq Domain Protein Glutamine Amidotransferase; Cobyric Acid; Cobyric Acid Synthase Glutamine Amidotransferase; Glutamine Amidotransferase-Like Protein; Glutamine Amidotransferase Domain Protein; Cobyric Acid Synthase Cobq; CobB/CobQ Family Glutamine Amidotransferase; Cobyric Acid Synthase Like; Glutamine Amidotransferase Domain-Containing Protein; Cobyric Acid Synthase CbiP
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MAYISLKSNLENPKYSLNVAHLYGDLMNTYGDNGNILMLKYVGEKLGAEMTFNIVSLGDTFAKEDYDLVFWGGGQDYEQE IIADQSLIDLSAPLKDYIESEKPLLAICGGYQMLGQYYVNSEGTKIQGTGILGHYTENLRTDRFIGDIETHNEEFGETYY GFENHSGITYLSDDEKPLGTVVYGGGNNPDDQTEGLIYKNTFGTYFHGPILSRNARLAYRLVTTALYQKYGEEIQLPAFE EILADEDKGQQIGDLKRKVEK
Sequences:
>Translated_261_residues MAYISLKSNLENPKYSLNVAHLYGDLMNTYGDNGNILMLKYVGEKLGAEMTFNIVSLGDTFAKEDYDLVFWGGGQDYEQE IIADQSLIDLSAPLKDYIESEKPLLAICGGYQMLGQYYVNSEGTKIQGTGILGHYTENLRTDRFIGDIETHNEEFGETYY GFENHSGITYLSDDEKPLGTVVYGGGNNPDDQTEGLIYKNTFGTYFHGPILSRNARLAYRLVTTALYQKYGEEIQLPAFE EILADEDKGQQIGDLKRKVEK >Mature_260_residues AYISLKSNLENPKYSLNVAHLYGDLMNTYGDNGNILMLKYVGEKLGAEMTFNIVSLGDTFAKEDYDLVFWGGGQDYEQEI IADQSLIDLSAPLKDYIESEKPLLAICGGYQMLGQYYVNSEGTKIQGTGILGHYTENLRTDRFIGDIETHNEEFGETYYG FENHSGITYLSDDEKPLGTVVYGGGNNPDDQTEGLIYKNTFGTYFHGPILSRNARLAYRLVTTALYQKYGEEIQLPAFEE ILADEDKGQQIGDLKRKVEK
Specific function: Unknown
COG id: COG3442
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29340; Mature: 29209
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYISLKSNLENPKYSLNVAHLYGDLMNTYGDNGNILMLKYVGEKLGAEMTFNIVSLGDT CEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCEEEEEEEECCCH FAKEDYDLVFWGGGQDYEQEIIADQSLIDLSAPLKDYIESEKPLLAICGGYQMLGQYYVN HCCCCCEEEEECCCCCHHHHHHHCCHHHHHCCCHHHHHCCCCCEEEEECCHHHHHHEEEC SEGTKIQGTGILGHYTENLRTDRFIGDIETHNEEFGETYYGFENHSGITYLSDDEKPLGT CCCCEEEECCEEEECHHCCCCCCEECCHHHCCHHHCHHHCCCCCCCCEEEECCCCCCCEE VVYGGGNNPDDQTEGLIYKNTFGTYFHGPILSRNARLAYRLVTTALYQKYGEEIQLPAFE EEECCCCCCCCCCCCEEEECCCCCEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHH EILADEDKGQQIGDLKRKVEK HHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AYISLKSNLENPKYSLNVAHLYGDLMNTYGDNGNILMLKYVGEKLGAEMTFNIVSLGDT EEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCEEEEEEEECCCH FAKEDYDLVFWGGGQDYEQEIIADQSLIDLSAPLKDYIESEKPLLAICGGYQMLGQYYVN HCCCCCEEEEECCCCCHHHHHHHCCHHHHHCCCHHHHHCCCCCEEEEECCHHHHHHEEEC SEGTKIQGTGILGHYTENLRTDRFIGDIETHNEEFGETYYGFENHSGITYLSDDEKPLGT CCCCEEEECCEEEECHHCCCCCCEECCHHHCCHHHCHHHCCCCCCCCEEEECCCCCCCEE VVYGGGNNPDDQTEGLIYKNTFGTYFHGPILSRNARLAYRLVTTALYQKYGEEIQLPAFE EEECCCCCCCCCCCCEEEECCCCCEECCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHH EILADEDKGQQIGDLKRKVEK HHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA