Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yjhB
Identifier: 15672927
GI number: 15672927
Start: 971242
End: 972183
Strand: Reverse
Name: yjhB
Synonym: L171002
Alternate gene names: NA
Gene position: 972183-971242 (Counterclockwise)
Preceding gene: 15672946
Following gene: 15672863
Centisome position: 41.1
GC content: 31.85
Gene sequence:
>942_bases ATGACTTTAAAAACTTTTTTTAATTTTACACGTATTCAAACCTTGCCCGCAGCATTATTATCACCGATTGCTGGCTGTCT TTTTGCCTTTTGGTACTTTGGAAGTTTTCATTTTTGGCCTACGCTTCTATTTTTTATTGGTTTAGCAAGCATTAATCTTT TTGTTTCGGCTTGGAATAATCTGATGGATTATCAAAAAGCACTTGATCCTGAGTATAAGAAATGGAATATTATCGTTGCT AAATCGATTAATCCTAAACTTGCTTTAAACATTTGTTTGGCACTTTTAGCGATTGATGTAGTCGTTGGACTAATTGTTCT TTTCTTGACTAATCTTGCGATTTTACCAATTGGTGGACTTTGTTTCTTAATTGCTATTTTCTATACTTATGGTCCTTTTG CTTTTTCTCGTTTTCCTTTGGGCGAAATTTTAGCGGGTCTTTGCGAAGGGTTCTTTGGTTTTTTCCTTGCTGTCTATATT AATTCTTATGATAAAGGCTATTTTTTCATTAATTTTGACAGGAATTGGTTCATGACATGGACTTGGGACTTTAAAATTCT TTTACCAATCCTTCTAGTCGGTCTAATGTGTTTTGTTCAAAATTTTAATATTATGTTTTCTGATAATATTTGCGATTTAG AACAGGACATTCGCAATGAGCGTTATACTTTACCTTATTATCTAAAGATTCCACTCAGTTTAAAAGTATTTACTGGACTA TATTTATTTGCTGGACTTTGTATTTTAATTGCCATTGCTTTGGGAATTTTACCAATTTGGTCATTATTAATGAGCATCAT TGCCCTGAAAGTTATTCCTAATATTAAAAAATTTAGAGCCAAACAAAGTAAATCAGAGACTTTCCACCTTCAAATTGACA ATCTGATGTTATTTAATGCTTCTCTTGCCCTTACGTTGTTACTGGGAATTATTTTTAAGTAA
Upstream 100 bases:
>100_bases CATTCAATTTTCTTGTCAGTAAAATAAACTTTTGCTGACAGCTCTGTCAGTCAAAATCATTCATGATTTATTGGCTAGTT TTTGCTATAATCAGCTTATC
Downstream 100 bases:
>100_bases AATAAAAAAGCGCTTAGCGCTTTTTTTACTTTTCCAAAGAGAAATCCATGACGACCGGCTGGTGGTCCGATGATTTGAAC TGATTATCAATGGTTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: UbiA Prenyltransferase; Prenyltransferase; 1 4-Dihydroxy-2-Naphtoate Prenyltransferase; 1 4-Dihydroxy-2-Naphthoate Polyprenyltransferase; 1 4-Dihydroxy-2-Naphthoate Octaprenyl Transferase; Ubia Prenyltransferase; Prenyltransferase UbiA Family; Prenyltransferase UbiA Superfamily; Prenyltransferase Ubia Family
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTLKTFFNFTRIQTLPAALLSPIAGCLFAFWYFGSFHFWPTLLFFIGLASINLFVSAWNNLMDYQKALDPEYKKWNIIVA KSINPKLALNICLALLAIDVVVGLIVLFLTNLAILPIGGLCFLIAIFYTYGPFAFSRFPLGEILAGLCEGFFGFFLAVYI NSYDKGYFFINFDRNWFMTWTWDFKILLPILLVGLMCFVQNFNIMFSDNICDLEQDIRNERYTLPYYLKIPLSLKVFTGL YLFAGLCILIAIALGILPIWSLLMSIIALKVIPNIKKFRAKQSKSETFHLQIDNLMLFNASLALTLLLGIIFK
Sequences:
>Translated_313_residues MTLKTFFNFTRIQTLPAALLSPIAGCLFAFWYFGSFHFWPTLLFFIGLASINLFVSAWNNLMDYQKALDPEYKKWNIIVA KSINPKLALNICLALLAIDVVVGLIVLFLTNLAILPIGGLCFLIAIFYTYGPFAFSRFPLGEILAGLCEGFFGFFLAVYI NSYDKGYFFINFDRNWFMTWTWDFKILLPILLVGLMCFVQNFNIMFSDNICDLEQDIRNERYTLPYYLKIPLSLKVFTGL YLFAGLCILIAIALGILPIWSLLMSIIALKVIPNIKKFRAKQSKSETFHLQIDNLMLFNASLALTLLLGIIFK >Mature_312_residues TLKTFFNFTRIQTLPAALLSPIAGCLFAFWYFGSFHFWPTLLFFIGLASINLFVSAWNNLMDYQKALDPEYKKWNIIVAK SINPKLALNICLALLAIDVVVGLIVLFLTNLAILPIGGLCFLIAIFYTYGPFAFSRFPLGEILAGLCEGFFGFFLAVYIN SYDKGYFFINFDRNWFMTWTWDFKILLPILLVGLMCFVQNFNIMFSDNICDLEQDIRNERYTLPYYLKIPLSLKVFTGLY LFAGLCILIAIALGILPIWSLLMSIIALKVIPNIKKFRAKQSKSETFHLQIDNLMLFNASLALTLLLGIIFK
Specific function: Unknown
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35831; Mature: 35699
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTFFNFTRIQTLPAALLSPIAGCLFAFWYFGSFHFWPTLLFFIGLASINLFVSAWNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LMDYQKALDPEYKKWNIIVAKSINPKLALNICLALLAIDVVVGLIVLFLTNLAILPIGGL HHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH CFLIAIFYTYGPFAFSRFPLGEILAGLCEGFFGFFLAVYINSYDKGYFFINFDRNWFMTW HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE TWDFKILLPILLVGLMCFVQNFNIMFSDNICDLEQDIRNERYTLPYYLKIPLSLKVFTGL EEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCEEEEECCHHHHHHHH YLFAGLCILIAIALGILPIWSLLMSIIALKVIPNIKKFRAKQSKSETFHLQIDNLMLFNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCEEEEHH SLALTLLLGIIFK HHHHHHHHHHHCC >Mature Secondary Structure TLKTFFNFTRIQTLPAALLSPIAGCLFAFWYFGSFHFWPTLLFFIGLASINLFVSAWNN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LMDYQKALDPEYKKWNIIVAKSINPKLALNICLALLAIDVVVGLIVLFLTNLAILPIGGL HHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH CFLIAIFYTYGPFAFSRFPLGEILAGLCEGFFGFFLAVYINSYDKGYFFINFDRNWFMTW HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE TWDFKILLPILLVGLMCFVQNFNIMFSDNICDLEQDIRNERYTLPYYLKIPLSLKVFTGL EEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCEEEEECCHHHHHHHH YLFAGLCILIAIALGILPIWSLLMSIIALKVIPNIKKFRAKQSKSETFHLQIDNLMLFNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCEEEEHH SLALTLLLGIIFK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA