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The map label for this gene is ygcC

Identifier: 15672617

GI number: 15672617

Start: 624257

End: 625909

Strand: Direct

Name: ygcC

Synonym: L24228

Alternate gene names: 15672617

Gene position: 624257-625909 (Clockwise)

Preceding gene: 15672616

Following gene: 15672618

Centisome position: 26.39

GC content: 34.85

Gene sequence:

>1653_bases
TTGGTGGACAAAGAAACAACTGAATTTTCTCGAGGAAGTTTTAAAGAAAAAATACTTCGCCAACTTGAAGAAAATGCAGC
GAAACAAGCAGAAACTAAGTTCCCAGACCCTGAAGATTTCGAACGTCCCAGCAGGAGTGACTCAGAAGAACCTGAGCGAA
AAATCGAACCAAGGAAAGTTGATCTTGAACCTTTCAAACTTCCCGTCTTTGATTTTCCAGCAGCGGATGAAAACGAAGAA
GAACCTTTTGTAGAAAATGAAAACCTTTCAGAAGAAGGCGATTCATTGCGTAAAAATTTAGATGGAGTGGTTTCTGAGGA
AATTCAAAACCAAGATATTCCTCCTCAATTTTCAAGAAGTGAATCAAAAGTTCAAGATGAAAAGATTGAACAAGAACAAT
TTTCAGAAAAAAAAGAATCAGAAAAAATGGTTAAACATCAACCTTCAAGAAGAACCAACAGTTCTTCTAAAAAAACTTCT
TCTATCAAGAAAAACAAGAATAAGAACAAAAATAAGAAAAAGAAAAAAGTAACAGCAGGAAAAATCATTGCTGTGATTGT
TGTTCTTTTAGTTTTAGTTGTTGGAGGAACTGGTTGGTATGGCTATAACTTTGTAAAATCTGGCATTCAACCTTTGGATT
CTAAGAATGCAACAGCTAAGTCAATCAATATTCCTGCTGGTTCAAGTAGTAAGCAAATTGGTGAAATTTTGCAAAGACAA
TCCATTATTAAAAATGGAATGGTTTTTCAGTATTATACAAAATTTAAAAATTATTCAGAGTTTAAAAGCGGCTATTATAA
TCTTGCACCAAACATGAGCTTATCTACAATTGCTGGTAAACTTGAAGAAGGCGGAACAGAAAAACCTGTTGCTCCAACTT
TAGGTAAAATTTTAGTTCCTGAAGGCTATACGCTAACACAAATTGCTAAAGCTGTGACAGTTAATAGTGGAAGCAATGAA
AAGAATGCAAAAACGCCATTTTCTGAAGCAGACTTCATGAAAACCGTTCAAGACCCAACCTTTATCGCTAAAATGGTTAA
GGCTTATCCTAAACTGTTCGCAAGCTTGCCAACAAAAGATTCAGGAATCAAATATCAGTTAGAAGGTTACTTGTTCCCAG
CGACTTATGATTACACAAAATCATCGACAGTTGAATCAGTCATTGAAAATATGATTCAAGCAGCCAATACTCAGCTCACT
CCTTACTATGATACAATTGCTCAAAAGAATTTGACTGTCAATGAAGTTTTGAGTTTAGCAGCTTTGGTTGAAAAAGAAGC
CAACAATGATGATGATCGACGAAATGTTGCTGGAACCTTCTATAATCGTATGAATGCTGGAATGACTTTGGGTTCTAATC
TGTCAATTCTTTATGCCGAAGGTAAACTTGGTGAAAAAACAAGTCTTTCAGAGGATGCTAATATTGACACCAACCTAGAT
TCGCCATATAATTTGTATGCAAATACTGGATTTGGCCCTGGTCCTGTTGATAGTCCAAGTTTATCATCTATTAAAGCAGT
ACTTGATCCTGCTCAAAATGACTACTTATACTTTGTTGCTGACGTAACAACAGGGAAAGTTTATTTTGCTAAAAACTTAG
ATGAACAAAATGCAAATGTTCAAAAATATGTGAATGATAAGATAAGTAGCTAA

Upstream 100 bases:

>100_bases
GAATATTCCCTTTTTATTTGTAAAAAATTAAAAGAACGGTTACAATTAGGAAAAGTAAAATTTTATTATTGAGCGAAAGC
TAATCATAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
GCTATCATTAATTTAGATTTGATTAAAAGAGAAAAAAGTTTATAAAAAAGGAAAGAAATATAATGGAAAAAACATTCCCA
ATGACCCAAGAAGGGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKVDLEPFKLPVFDFPAADENEE
EPFVENENLSEEGDSLRKNLDGVVSEEIQNQDIPPQFSRSESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTS
SIKKNKNKNKNKKKKKVTAGKIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQ
SIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIAGKLEEGGTEKPVAPTLGKILVPEGYTLTQIAKAVTVNSGSNE
KNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLT
PYYDTIAQKNLTVNEVLSLAALVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLD
SPYNLYANTGFGPGPVDSPSLSSIKAVLDPAQNDYLYFVADVTTGKVYFAKNLDEQNANVQKYVNDKISS

Sequences:

>Translated_550_residues
MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKVDLEPFKLPVFDFPAADENEE
EPFVENENLSEEGDSLRKNLDGVVSEEIQNQDIPPQFSRSESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTS
SIKKNKNKNKNKKKKKVTAGKIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQ
SIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIAGKLEEGGTEKPVAPTLGKILVPEGYTLTQIAKAVTVNSGSNE
KNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLT
PYYDTIAQKNLTVNEVLSLAALVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLD
SPYNLYANTGFGPGPVDSPSLSSIKAVLDPAQNDYLYFVADVTTGKVYFAKNLDEQNANVQKYVNDKISS
>Mature_550_residues
MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKVDLEPFKLPVFDFPAADENEE
EPFVENENLSEEGDSLRKNLDGVVSEEIQNQDIPPQFSRSESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTS
SIKKNKNKNKNKKKKKVTAGKIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQ
SIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIAGKLEEGGTEKPVAPTLGKILVPEGYTLTQIAKAVTVNSGSNE
KNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLT
PYYDTIAQKNLTVNEVLSLAALVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLD
SPYNLYANTGFGPGPVDSPSLSSIKAVLDPAQNDYLYFVADVTTGKVYFAKNLDEQNANVQKYVNDKISS

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=325, Percent_Identity=26.4615384615385, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 61213; Mature: 61213

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKV
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHCCCCEE
DLEPFKLPVFDFPAADENEEEPFVENENLSEEGDSLRKNLDGVVSEEIQNQDIPPQFSRS
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTSSIKKNKNKNKNKKKKKVTAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQ
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
SIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIAGKLEEGGTEKPVAPTLGKILVP
HHHHCCCEEEHHHHHCCHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECC
EGYTLTQIAKAVTVNSGSNEKNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKD
CCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
SGIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLTPYYDTIAQKNLTVNEVLSLA
CCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHH
ALVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
SPYNLYANTGFGPGPVDSPSLSSIKAVLDPAQNDYLYFVADVTTGKVYFAKNLDEQNANV
CCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHH
QKYVNDKISS
HHHHHHHCCC
>Mature Secondary Structure
MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKV
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHCCCCEE
DLEPFKLPVFDFPAADENEEEPFVENENLSEEGDSLRKNLDGVVSEEIQNQDIPPQFSRS
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTSSIKKNKNKNKNKKKKKVTAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
KIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQ
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
SIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIAGKLEEGGTEKPVAPTLGKILVP
HHHHCCCEEEHHHHHCCHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECC
EGYTLTQIAKAVTVNSGSNEKNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKD
CCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
SGIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLTPYYDTIAQKNLTVNEVLSLA
CCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHH
ALVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLD
HHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
SPYNLYANTGFGPGPVDSPSLSSIKAVLDPAQNDYLYFVADVTTGKVYFAKNLDEQNANV
CCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHH
QKYVNDKISS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]