Click here to switch to the map view.

The map label for this gene is ygbB

Identifier: 15672607

GI number: 15672607

Start: 614196

End: 614861

Strand: Direct

Name: ygbB

Synonym: L14190

Alternate gene names: 15672607

Gene position: 614196-614861 (Clockwise)

Preceding gene: 15672606

Following gene: 15672608

Centisome position: 25.96

GC content: 36.79

Gene sequence:

>666_bases
ATGACAATTATAGGTGTAAAAATTGACAAAAAGTTTATGAGGGACTTACTCATACTTATTTTAGGTGTCGGACTTTATGT
ACTCTCAGTTCAGTTATTCGTCATCCCTAATCGTCTAGCAAGTAATGGTGTCGCTGGTTTTTCTGTACTTATGGATTTTG
TTTTTGGCATCAACCCAGCCTTGACTTTCTTTTTGGTAAATGTACCACTTTTCATTTTCGGAGGACGTTCGCTTCCGCGG
AGAATTTTACTACTGAGCATTCCTGGAGCGCTTGCCATGAGTGGTTGGTTAATGATTTATGAAGCATTAGGAGTTACTGG
TTTCCAATTCTCACATGTTATTTTTGCTGGAATTTTCGATGGACTTCTTTCAGGATTCGGGGCAGGATTAGTTATTATTT
CTGAAGGAACATTTGGAGGATCAATCTTATTGAGCCGAATTTTGGAGGAGCAATGGAACTTTAAAATTGACAAGGTTTTG
TTTATGGTCGATGTGGTCGTTTTAAGTGTTTCCTTATTAACATTCTTGTCACTTCCTAACTTTGCGGTCACACTACTTTC
ATGCTATATCTTTAGTAAAATGACTCTGATTGTGGGACGTGAAGATTATCGGAAATCTTTAATGAATCGTGGAAAAAGAA
TTTATCAAAAAGTTTTTGCTGCATAA

Upstream 100 bases:

>100_bases
AGACTCTTTAATAATTAACTGGTTAAGGTTAAGATTAGGTGCATGTGATATATTAGTAGCAGTTGTAATAAATAAATGAT
AAAGAAAGAAGGTAAGAAAT

Downstream 100 bases:

>100_bases
AAACTTTAAGAATAATAGAATAAAAATTACTGACAGAAATTGAGCTGTCAGTAATTTTTTCTTGTCAGTGCTTGAATTTA
CAGGCTATTTCTGAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGVAGFSVLMDFVFGINPALTFFLVNVPLFIFGGRSLPR
RILLLSIPGALAMSGWLMIYEALGVTGFQFSHVIFAGIFDGLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVL
FMVDVVVLSVSLLTFLSLPNFAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKVFAA

Sequences:

>Translated_221_residues
MTIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGVAGFSVLMDFVFGINPALTFFLVNVPLFIFGGRSLPR
RILLLSIPGALAMSGWLMIYEALGVTGFQFSHVIFAGIFDGLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVL
FMVDVVVLSVSLLTFLSLPNFAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKVFAA
>Mature_220_residues
TIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGVAGFSVLMDFVFGINPALTFFLVNVPLFIFGGRSLPRR
ILLLSIPGALAMSGWLMIYEALGVTGFQFSHVIFAGIFDGLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVLF
MVDVVVLSVSLLTFLSLPNFAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKVFAA

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 24391; Mature: 24260

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGVAGFSVLMDFVFGINPA
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCHH
LTFFLVNVPLFIFGGRSLPRRILLLSIPGALAMSGWLMIYEALGVTGFQFSHVIFAGIFD
HHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVLFMVDVVVLSVSLLTFLSLPN
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
FAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKVFAA
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGVAGFSVLMDFVFGINPA
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHHHHHCCCHH
LTFFLVNVPLFIFGGRSLPRRILLLSIPGALAMSGWLMIYEALGVTGFQFSHVIFAGIFD
HHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVLFMVDVVVLSVSLLTFLSLPN
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
FAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKVFAA
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]