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The map label for this gene is ygaB

Identifier: 15672595

GI number: 15672595

Start: 601790

End: 602683

Strand: Direct

Name: ygaB

Synonym: L1778

Alternate gene names: 15672595

Gene position: 601790-602683 (Clockwise)

Preceding gene: 15672594

Following gene: 15672597

Centisome position: 25.44

GC content: 33.11

Gene sequence:

>894_bases
ATGAAAAAAGTTATACAAAAAATTGCTGAACTAACGACAACTTTTATGACTTTTTTCAAAAGTTCAGAAATGAGTCTGTC
TTCAATTGCTGTTGCTTATTACCTTTTACTTGCAATCTTTCCTCTAGGATTGATTGTCGGAAATATTTTACCCTTCTTAC
ATATCAATACAACAGCTTTATTGAGCTTTTTGTCTGAGCAACTCCCAAGTGATGTTTACAAAGGAATTGAACCAGTCATT
AATAATCTCTTAAATCAAAGAAATACAGGCTTACTTTCACTCTCTGTTTTAGCAGGATTTTGGACCTTTTCAAGAGCCTT
ATCTGCTCTACAAATGTCAATGAATAAAGCTTATGAAGTCTTTAATCATCGAGATTTTATTGTCAGTCGAATTATCGGTT
TAGCTGCCGGATTTGCGATTTTACTCTTTCTTTACTTTTCAATTGTTCTCTCTACTTTTGGACAATTAATTCTTGAACAA
GTTCATCGCTTATTTCCTTTTGATGATCATCTCTACCGAACTTTACACAATATGACTTTACCAGCGATTGCTGTAGCGAC
CTTTCTATCTTTGATGATGCTTTATTTTATCCTACCAAATGTTAAAATAAGAAAATTGAGATACACCATGCCTGGAACAA
TATTTTCAACCTTTGTTCTTGTTTTTCTAACCAACTGGATTGCAAAATATGTTAGCTTTGCTCTTCAGCGATTAGATGAC
TTGAAATTGATTGGGTCATTGGTTGTCTTTGCACTGATGATTTGGTTTATTTTCATCGCCCGCGTTTTGATTATTGGTGC
CATATTAAATGCTGTTTATCAAAAAACAAAAGTTGGTAAGATTGAGACACGACGTGGTGAAATTGTTGAATTCATCAAGG
AAATTAGAAAATAA

Upstream 100 bases:

>100_bases
CACCAGTTTGTTATCACTAAAGATGGTCCTGTGATTTTGACTTCTCAAGGCGAAGAACGGACTTATTAAGAAGTAAAAGG
AAAAACAGATGAGAGGAAAG

Downstream 100 bases:

>100_bases
AAATACTGATAAAAATGAGAAAAAATACTGACAGAAAATCTGTCAGTATTTTTTTTATCCGCCGATTCAATGCTCACTTT
GCTTACATTGAACTGTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTALLSFLSEQLPSDVYKGIEPVI
NNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQ
VHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRLDD
LKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGKIETRRGEIVEFIKEIRK

Sequences:

>Translated_297_residues
MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTALLSFLSEQLPSDVYKGIEPVI
NNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQ
VHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRLDD
LKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGKIETRRGEIVEFIKEIRK
>Mature_297_residues
MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTALLSFLSEQLPSDVYKGIEPVI
NNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQ
VHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRLDD
LKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGKIETRRGEIVEFIKEIRK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 33843; Mature: 33843

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTAL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNMTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRLDD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGKIETRRGEIVEFIKEIRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTAL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNMTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRLDD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGKIETRRGEIVEFIKEIRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]