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The map label for this gene is yfcF

Identifier: 15672520

GI number: 15672520

Start: 523468

End: 524346

Strand: Direct

Name: yfcF

Synonym: L123471

Alternate gene names: 15672520

Gene position: 523468-524346 (Clockwise)

Preceding gene: 15672519

Following gene: 15672523

Centisome position: 22.13

GC content: 35.84

Gene sequence:

>879_bases
ATGGAAAAAAGAACAAGAGATTATAAAAAAAATGGCTCTAAAAAAATGAGTAAACAAGGGAAAGTACTTATTCTAGCTTT
ATTAGCATTTCTAATTTTCTTTGTTGGCTTTAAAATATATCATAGTAAAGATGTTCAGGCTTCAACGATTAAATTGGTTA
ATAAATCAAATGAGACTTATGCTTACTCTGGGTCAAAAAAATTAACGGGTCTTCAAAAAATTAATGGGAATAATTATTAT
TTTGATTCAACAACAGGTGTGATGAAGACAGGTTTGATGACTTTGGATGGTGGAACGGTTTATTTCAGTCCACAAACGGG
GAAAATGGTTTATGGATTACAAAAAATTAATGGTTATTATTACTATTTTACAAAAAAGACGGGTAAAGATGATGTGGTTA
AAGCTTATGAAGCGGTGGCCAGCCAATTGAAATCTGATAATTCAGTGATTGAAAAAACAATTTCATCAGGAATGAAACTG
GTTGGGAAAAGTCCATATGTTTATGGTGGAGGGCGTACTGATGATTCGGTAGCTGCCAATGAATTTGATTGTTCGAGTTT
TATTGCTCAAATGTTCCGGTTAGGCGGTCAATCTTTGGTTTATCAATTTGCGGCTTCAACCTCCTTGCTAGCTCAAACTG
GCGAGGCTGAAGATTGGTCAGATAAGGCGCGTGGTGATTTATTAATTACAGCTGACGATGCAAGTGAGGATGAGCAACAT
GCGGCTATCTATCTTGGCGGAGGATTTATTCTACATGACTCAACAAGTACTAATGGAGTGAGCATTAGTCGTTTAAATCA
GGTCATCAATAAGAAAGTTTTAGGAACAATGACTTGGGGACAACTTTTTGAGCCAGGACATGTTCGTCGTGAAGTTTAA

Upstream 100 bases:

>100_bases
TATAAAAGTGATTTGAAGATAATTTCAAACCACTTTTCTTATCCAAATCTTAAATTGTTCTTATTAAGTTATCATTAAAC
TTGGAGTGGTATAACTAGAT

Downstream 100 bases:

>100_bases
AATTTACTGACAGAATAAAAAAATTACTGACAAAAATCTGTCAGTAAATTTTTTTATTATTTAGCGATTTCAGCATGACG
TAAATCAAAAATCATGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKDVQASTIKLVNKSNETYAYSGSKKLTGLQKINGNNYY
FDSTTGVMKTGLMTLDGGTVYFSPQTGKMVYGLQKINGYYYYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKL
VGKSPYVYGGGRTDDSVAANEFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAEDWSDKARGDLLITADDASEDEQH
AAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGTMTWGQLFEPGHVRREV

Sequences:

>Translated_292_residues
MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKDVQASTIKLVNKSNETYAYSGSKKLTGLQKINGNNYY
FDSTTGVMKTGLMTLDGGTVYFSPQTGKMVYGLQKINGYYYYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKL
VGKSPYVYGGGRTDDSVAANEFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAEDWSDKARGDLLITADDASEDEQH
AAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGTMTWGQLFEPGHVRREV
>Mature_292_residues
MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKDVQASTIKLVNKSNETYAYSGSKKLTGLQKINGNNYY
FDSTTGVMKTGLMTLDGGTVYFSPQTGKMVYGLQKINGYYYYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKL
VGKSPYVYGGGRTDDSVAANEFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAEDWSDKARGDLLITADDASEDEQH
AAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGTMTWGQLFEPGHVRREV

Specific function: Shows a cell wall hydrolytic DL-endopeptidase activity [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C40 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 32140; Mature: 32140

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKDVQASTIKLVNKSNETY
CCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEECCCCEE
AYSGSKKLTGLQKINGNNYYFDSTTGVMKTGLMTLDGGTVYFSPQTGKMVYGLQKINGYY
EECCCCCCCEEEEECCCEEEEECCCHHHHHCCEEECCCEEEECCCCCCEEEEEEEECCEE
YYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKLVGKSPYVYGGGRTDDSVAAN
EEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCC
EFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAEDWSDKARGDLLITADDASEDEQH
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCC
AAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGTMTWGQLFEPGHVRREV
EEEEEECEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKDVQASTIKLVNKSNETY
CCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCHHEEEEEECCCCEE
AYSGSKKLTGLQKINGNNYYFDSTTGVMKTGLMTLDGGTVYFSPQTGKMVYGLQKINGYY
EECCCCCCCEEEEECCCEEEEECCCHHHHHCCEEECCCEEEECCCCCCEEEEEEEECCEE
YYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKLVGKSPYVYGGGRTDDSVAAN
EEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCC
EFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAEDWSDKARGDLLITADDASEDEQH
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCC
AAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGTMTWGQLFEPGHVRREV
EEEEEECEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA