Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is dukA
Identifier: 15672477
GI number: 15672477
Start: 493469
End: 494122
Strand: Reverse
Name: dukA
Synonym: L93481
Alternate gene names: NA
Gene position: 494122-493469 (Counterclockwise)
Preceding gene: 15672479
Following gene: 15672476
Centisome position: 20.89
GC content: 31.5
Gene sequence:
>654_bases ATGACAGTGCTAGTATTAGCTGGAACAATCGGAGCAGGAAAAAGCTCTTTAACTGAGATGTTGGCGGAGGAATTGAAAAC ACAAGCTTTTTATGAGAGTGTTGACGATAATAAAGTTTTGCCATTATTCTATGAGAACCCTCAAAAATATGCCTTCTTAT TACAAATATACTTTTTAAATAAGCGATTTGATTCAATCAAAAGAGCCTTGTCTGATAATAATAATGTATTAGACCGCTCG ATTTATGAAGATAGTCTGCTTTTTCATTTGAACGCCGATTTAGGACGAGCAGATGAAACGGAAGTCGAGGTTTATGATGA CTTACTTAACAATATGTTGGAAGAAATTGATAGTTTATCTTTCAAAAAAAGGCCTGATTTACTCATTCATGTCAAAGTTT CTTTTGATAAAATGCTAGAAAGAATCAAAAAAAGAGGACGTCAATTTGAACAATTGGAATACGATCCAAGTTTATATGAC TACTATAAAGAATTAAATAGCAGATATGATACTTGGTTTGAAGACTTTGATATTTGTCCCAAAATCCAAATTGGTGGCGA TAAATATGATTTTGTGGAGGACGAACAATCAAAAATTCATGTTTTGCAACAAATCAAAGAAAAATTAAAAGAAATTGAAG GAGAAAATAATTAA
Upstream 100 bases:
>100_bases GAGAACATTTTTTTGCACTATAATGAGCAAGCCTTGTTTATTTATTACTAATTTTTAATTAAACAATCACTAAAACTAAA AATAGAATGGTAAAGGTGTA
Downstream 100 bases:
>100_bases TGAATGTCACCGTCTTTCTTTCTTCAAGAGATGGAAAAAATCCAATCTATAAAGATACAAGCGAAAAATTAGGAATATTA CTTGCTAAATAAGGCCATAC
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGK; DGUO kinase; Deoxynucleoside kinase complex I F-component [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFYENPQKYAFLLQIYFLNKRFDSIKRALSDNNNVLDRS IYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYD YYKELNSRYDTWFEDFDICPKIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN
Sequences:
>Translated_217_residues MTVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFYENPQKYAFLLQIYFLNKRFDSIKRALSDNNNVLDRS IYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYD YYKELNSRYDTWFEDFDICPKIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN >Mature_216_residues TVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFYENPQKYAFLLQIYFLNKRFDSIKRALSDNNNVLDRSI YEDSLLFHLNADLGRADETEVEVYDDLLNNMLEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYDY YKELNSRYDTWFEDFDICPKIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN
Specific function: DGK/DAK plays an essential role in generating the deoxyribonucleotide precursors, dGTP and dATP, for DNA metabolism [H]
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 25568; Mature: 25437
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFYENPQKYAFLLQIYFLN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH KRFDSIKRALSDNNNVLDRSIYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEEIDSLS HHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC FKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYDYYKELNSRYDTWFEDFDICP CCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC KIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFYENPQKYAFLLQIYFLN EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH KRFDSIKRALSDNNNVLDRSIYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEEIDSLS HHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC FKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYDYYKELNSRYDTWFEDFDICP CCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC KIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896798; 8172906 [H]