Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is pi133
Identifier: 15672450
GI number: 15672450
Start: 464045
End: 464497
Strand: Direct
Name: pi133
Synonym: L64021
Alternate gene names: NA
Gene position: 464045-464497 (Clockwise)
Preceding gene: 30023998
Following gene: 15672451
Centisome position: 19.62
GC content: 33.55
Gene sequence:
>453_bases TTGGCTAAAAAAAGTTTTAAAGATATTAATGACGGTCGTTTGATCTATCAGCCACCAGACCATCTTGGACGTACTGCAAA ACAAATTTGGCGTAGAGTTGTCCTTTTTTTAGAAACACAAAAGCCTGTAGAACGAATTGACCAAACATTGGTTGAAATGT ATTGCACTCAGTATGAAATTTATAGAAATTCATACGAACATCTTAAAAAACATGGTGAGGTTCAAGAAATTTATAAACCA GTTCAAGATATGACTGGTGAAATTATTGATAGACAGTTCCAAGGATTTAAACGTAATCCAATGACTCAAATTTACTCTGA TGCAATAAAAAATCTTACAAAGATTGGTTCTGAATTAGGCTTATCTCCAAAATCTCGTTCAGAGTTAATGGGATTGAATA TGCAGGAAGATGAAGAAGAAATTGATTGGACTTCTAAGTTCGGTGGTGGTTAA
Upstream 100 bases:
>100_bases TTAGGAATACCGTATACCAATGGTGGCTTCCTGAGTAAAAAAGTGATTTTTTAAAATTTTTGCATAGGGGGGGTCAAGAC AAATAAGAAAGGAGAATTTT
Downstream 100 bases:
>100_bases TGGATAACTATAAAGATTTAACAGAACGTTATCCAGATGACCCAGCTTTATCTTATGCAATTGGTGTGCTTGACGGCACT ATAATCTCAGGGGAAAAAAT
Product: terminase small subunit
Products: NA
Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase; Terminase Small Subunit
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKP VQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG
Sequences:
>Translated_150_residues MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKP VQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG >Mature_149_residues AKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKPV QDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG
Specific function: Unknown
COG id: COG3747
COG function: function code L; Phage terminase, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17592; Mature: 17461
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEI CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC LSPKSRSELMGLNMQEDEEEIDWTSKFGGG CCCCCHHHHHCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure AKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEI CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC LSPKSRSELMGLNMQEDEEEIDWTSKFGGG CCCCCHHHHHCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA