Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is pi133

Identifier: 15672450

GI number: 15672450

Start: 464045

End: 464497

Strand: Direct

Name: pi133

Synonym: L64021

Alternate gene names: NA

Gene position: 464045-464497 (Clockwise)

Preceding gene: 30023998

Following gene: 15672451

Centisome position: 19.62

GC content: 33.55

Gene sequence:

>453_bases
TTGGCTAAAAAAAGTTTTAAAGATATTAATGACGGTCGTTTGATCTATCAGCCACCAGACCATCTTGGACGTACTGCAAA
ACAAATTTGGCGTAGAGTTGTCCTTTTTTTAGAAACACAAAAGCCTGTAGAACGAATTGACCAAACATTGGTTGAAATGT
ATTGCACTCAGTATGAAATTTATAGAAATTCATACGAACATCTTAAAAAACATGGTGAGGTTCAAGAAATTTATAAACCA
GTTCAAGATATGACTGGTGAAATTATTGATAGACAGTTCCAAGGATTTAAACGTAATCCAATGACTCAAATTTACTCTGA
TGCAATAAAAAATCTTACAAAGATTGGTTCTGAATTAGGCTTATCTCCAAAATCTCGTTCAGAGTTAATGGGATTGAATA
TGCAGGAAGATGAAGAAGAAATTGATTGGACTTCTAAGTTCGGTGGTGGTTAA

Upstream 100 bases:

>100_bases
TTAGGAATACCGTATACCAATGGTGGCTTCCTGAGTAAAAAAGTGATTTTTTAAAATTTTTGCATAGGGGGGGTCAAGAC
AAATAAGAAAGGAGAATTTT

Downstream 100 bases:

>100_bases
TGGATAACTATAAAGATTTAACAGAACGTTATCCAGATGACCCAGCTTTATCTTATGCAATTGGTGTGCTTGACGGCACT
ATAATCTCAGGGGAAAAAAT

Product: terminase small subunit

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase; Terminase Small Subunit

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKP
VQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG

Sequences:

>Translated_150_residues
MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKP
VQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG
>Mature_149_residues
AKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKPV
QDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17592; Mature: 17461

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEI
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
LSPKSRSELMGLNMQEDEEEIDWTSKFGGG
CCCCCHHHHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEI
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
LSPKSRSELMGLNMQEDEEEIDWTSKFGGG
CCCCCHHHHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA