Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is pi132
Identifier: 30023998
GI number: 30023998
Start: 463425
End: 463928
Strand: Direct
Name: pi132
Synonym: L63293
Alternate gene names: NA
Gene position: 463425-463928 (Clockwise)
Preceding gene: 15672448
Following gene: 15672450
Centisome position: 19.59
GC content: 39.68
Gene sequence:
>504_bases ATGAGGTTACACCGCTGTGCAAATGTAGGGTGTCGTGAATTGATACCCCTTAAACATAATTACTGCCAGAAGCATTACGA TGAACGCCTAGGCAATTACATCAATCAACGGGCAGAGAGTAAAGCTAAGGCATCTCTAACTTTAAGAGGACAACGTAACC AAGCTGAACAGAACAGAGAGTATGACCAGACAAGGCGAAAGGAATTACACAATGGATTCTATCAAGACAAACGTTGGTCT AAAGTATCTGAGTACGTCAAGGCAAGAGATGGTTATGTTGATGCGATTGAAGGTAAGGTATGGGACAAGGGCGACCTGAT AGCTGACCACATCATACCAAGACGATTGCTTTCGGGAATGGAACAATATAATACTGACAATCTATGGCTTCTAACTAAAT CGCAGCACAATAAAAAAACTGCAATAGAAAATAAGTTATCCGACCAGCAATTAAAAAATGTTGGGCGAGATTGGTGGAAA AAAGTTCTAAAAAATAAAAAATAG
Upstream 100 bases:
>100_bases GCTTCATAAGCTTGTTAGGGTTCGACTCCCTGACTTGCTATTATATTTTATTACAGGTTGTCCAATGGGCAGCCTTTTAT TGTTGGAAAGGAGATGCCCT
Downstream 100 bases:
>100_bases CCCCCCGTCATCGCTTTTAGGAATACCGTATACCAATGGTGGCTTCCTGAGTAAAAAAGTGATTTTTTAAAATTTTTGCA TAGGGGGGGTCAAGACAAAT
Product: prophage pi1 protein 32
Products: NA
Alternate protein names: Prophage Pi1 Protein; Phage-Related HNH Nuclease
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKASLTLRGQRNQAEQNREYDQTRRKELHNGFYQDKRWS KVSEYVKARDGYVDAIEGKVWDKGDLIADHIIPRRLLSGMEQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWK KVLKNKK
Sequences:
>Translated_167_residues MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKASLTLRGQRNQAEQNREYDQTRRKELHNGFYQDKRWS KVSEYVKARDGYVDAIEGKVWDKGDLIADHIIPRRLLSGMEQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWK KVLKNKK >Mature_167_residues MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKASLTLRGQRNQAEQNREYDQTRRKELHNGFYQDKRWS KVSEYVKARDGYVDAIEGKVWDKGDLIADHIIPRRLLSGMEQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWK KVLKNKK
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19912; Mature: 19912
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKASLTLRGQRNQAEQNRE CCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH YDQTRRKELHNGFYQDKRWSKVSEYVKARDGYVDAIEGKVWDKGDLIADHIIPRRLLSGM HHHHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH EQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWKKVLKNKK HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKASLTLRGQRNQAEQNRE CCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH YDQTRRKELHNGFYQDKRWSKVSEYVKARDGYVDAIEGKVWDKGDLIADHIIPRRLLSGM HHHHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH EQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWKKVLKNKK HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA