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The map label for this gene is pi101

Identifier: 15672418

GI number: 15672418

Start: 447236

End: 448369

Strand: Reverse

Name: pi101

Synonym: L47248

Alternate gene names: 15672418

Gene position: 448369-447236 (Counterclockwise)

Preceding gene: 15672419

Following gene: 15672412

Centisome position: 18.95

GC content: 31.31

Gene sequence:

>1134_bases
ATGGCAAGATATATAAAACGAGGTAAAGTCTGGCAATACGAAATATCTTACAAAGATACTGACGGCAAATATAAAAAACT
TAGAAAGAGTGGTTTCCCCAAAAAGGCCGATGCGATTTCAGAAGCTGGTGAAATTGAAGCTAACCTAGCCAAAGGTTTTT
ATACTGTCAGTCAAGATATTTTACTCACTGACCATTTCAAGCAATGGATAGAAATATTCAAAAAAGGTAAAGTATCAGAC
GGAACTTACAGAAAGTATTTGTACACACTATCTGTTCTAAAAAAGCACTTTTCAACAGCAACTATTAAAACAATGAATCG
TGTGAAATATCAAGAGATGTTAAATGAATTTGCTGAAGGTCATTCCGATTCATCTGTGAAACAAATTAATGTTCATGTAA
GAGCAAGCTTAGAAAATTTACTTGATGATTTTATTATAAAAAATGATTTTACAAAAGGAGCTATTTCTAAAGGAGGAAAA
GGTTCAAAAAGTGCTGAATTAAAATATTTAGACTTTGAGGACTTCACAAAATTAATTGCACTAGCTAAAGAAAAAATTAA
TCCTATTTACTCCTCATCTTTTATGATATACATTGCTGCCATGACTGGTATGAGATTTAGTGAGCTTTTGGGATTGACAT
GGGATAATGTGGACTTTGAAAAAGGACAGATATACGTAAAAAGGACTTGGGATATTTATAAAAATAATTTTGCACCAACT
AAGAATGACCAATCAGTTCGTTTTTTAGCCATTGACAGCTCGACTATGCAAGTCATGATAAATTATAAGGAACAGCAAGA
AAAACTCTTAAAACGGCTCGAAATTGAGCCAGAACACCCTTTTGTATTCTACAATATCAAGAATGGATTGATAACTAATA
ATTCACTCAATAAACAGCTAAGAAATATGTGTAAAAAACTTGGATTTAAAAAAATAATTACTTGTCACGGATTAAGACAT
ACTCACGCTTCTACTATGCTTTATAAGGGAATTAATATTTTATATGTTTCTAAAAGGCTCGGTCATAGTAGTTTGAACGT
TACAATGTCAGTATATTCCCATATCCTAAAAGAGCTTGAAGAAAAAGATAATGAGAATATCAAAAAAATCTTTAGTGAAA
TAAACGATGAGTGA

Upstream 100 bases:

>100_bases
TGGACGGCTAAGGCGGATTTATCATGAATGTAGTAAAGCACTTCTATCTGGAAGGCTTTTACTATACCATTTTATCAGAA
ATGAGGTATAAAAAGCAACA

Downstream 100 bases:

>100_bases
TTTGGCACAAATTTGGCACAAATCATAAAAAGAGCAACAAAAAAGCCTTGCTACGAAGGCAAGGCGAGGTTTGGCACCAT
GATCCGAGGGGGATTCGAAC

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGEIEANLAKGFYTVSQDILLTDHFKQWIEIFKKGKVSD
GTYRKYLYTLSVLKKHFSTATIKTMNRVKYQEMLNEFAEGHSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGK
GSKSAELKYLDFEDFTKLIALAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVDFEKGQIYVKRTWDIYKNNFAPT
KNDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIEPEHPFVFYNIKNGLITNNSLNKQLRNMCKKLGFKKIITCHGLRH
THASTMLYKGINILYVSKRLGHSSLNVTMSVYSHILKELEEKDNENIKKIFSEINDE

Sequences:

>Translated_377_residues
MARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGEIEANLAKGFYTVSQDILLTDHFKQWIEIFKKGKVSD
GTYRKYLYTLSVLKKHFSTATIKTMNRVKYQEMLNEFAEGHSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGK
GSKSAELKYLDFEDFTKLIALAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVDFEKGQIYVKRTWDIYKNNFAPT
KNDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIEPEHPFVFYNIKNGLITNNSLNKQLRNMCKKLGFKKIITCHGLRH
THASTMLYKGINILYVSKRLGHSSLNVTMSVYSHILKELEEKDNENIKKIFSEINDE
>Mature_376_residues
ARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGEIEANLAKGFYTVSQDILLTDHFKQWIEIFKKGKVSDG
TYRKYLYTLSVLKKHFSTATIKTMNRVKYQEMLNEFAEGHSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGKG
SKSAELKYLDFEDFTKLIALAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVDFEKGQIYVKRTWDIYKNNFAPTK
NDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIEPEHPFVFYNIKNGLITNNSLNKQLRNMCKKLGFKKIITCHGLRHT
HASTMLYKGINILYVSKRLGHSSLNVTMSVYSHILKELEEKDNENIKKIFSEINDE

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43707; Mature: 43576

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGEIEANLAKGFYTVSQDI
CCCCHHCCCEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCEEECCCCH
LLTDHFKQWIEIFKKGKVSDGTYRKYLYTLSVLKKHFSTATIKTMNRVKYQEMLNEFAEG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGKGSKSAELKYLDFEDFTKLIA
CCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHH
LAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVDFEKGQIYVKRTWDIYKNNFAPT
HHHHHCCHHHCCCCEEEEEHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEEEHHCCCCCCC
KNDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIEPEHPFVFYNIKNGLITNNSLNKQL
CCCCCEEEEEECCCEEEEEEECHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHH
RNMCKKLGFKKIITCHGLRHTHASTMLYKGINILYVSKRLGHSSLNVTMSVYSHILKELE
HHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCHHEEHHHHHHHHHHHHH
EKDNENIKKIFSEINDE
HCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGEIEANLAKGFYTVSQDI
CCCHHCCCEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCEEECCCCH
LLTDHFKQWIEIFKKGKVSDGTYRKYLYTLSVLKKHFSTATIKTMNRVKYQEMLNEFAEG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGKGSKSAELKYLDFEDFTKLIA
CCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHH
LAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVDFEKGQIYVKRTWDIYKNNFAPT
HHHHHCCHHHCCCCEEEEEHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEEEHHCCCCCCC
KNDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIEPEHPFVFYNIKNGLITNNSLNKQL
CCCCCEEEEEECCCEEEEEEECHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHH
RNMCKKLGFKKIITCHGLRHTHASTMLYKGINILYVSKRLGHSSLNVTMSVYSHILKELE
HHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCHHEEHHHHHHHHHHHHH
EKDNENIKKIFSEINDE
HCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]