Click here to switch to the map view.

The map label for this gene is trxH

Identifier: 15672371

GI number: 15672371

Start: 395394

End: 395711

Strand: Direct

Name: trxH

Synonym: L195348

Alternate gene names: 15672371

Gene position: 395394-395711 (Clockwise)

Preceding gene: 15672370

Following gene: 15672372

Centisome position: 16.71

GC content: 34.91

Gene sequence:

>318_bases
ATGATTATTCCAGAAAATATTGAAAATTTAGCCGAACTTGTAAAAGGACCGGAAAAGACAGTCTTCTTTTTCACGGCTGG
TTGGTGCGGAGATTGTAATTTTATTAAGCCAAAAATGCCAGAAATTGAAGTAGAAAATCCAGACTTTAAATTTGTTGAAG
TAGACCGTGATGAATATATGGATCTTGCGATTGAATGGGGAATTATGGGAATTCCAAGTTTTGTCGTGATTGAGGATGGC
AAAGAAAAAGCTCGTCTAGTAAATAAATTACGTAAAACAAAAGAAGAAGTCAATACTTTCTTAGCGAGTGCGAAATAG

Upstream 100 bases:

>100_bases
CTTTTGAAATCAATGCTAAAACTTTAGAAGTCTTTGAAAAAAATGAAAAAATTCTGTAAGAAAGCTTAGTATTCATTTAG
AAATAAAAGGAGAATGTAGA

Downstream 100 bases:

>100_bases
TATCATCGCAGGACAAGCGTTGATATATTAAGAATTATATTCTATAATAATCAAAGTTAAGAAATTAAAAGGGAAAAATA
AGAAAATGATTGCAACATAC

Product: thioredoxin H-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEVENPDFKFVEVDRDEYMDLAIEWGIMGIPSFVVIEDG
KEKARLVNKLRKTKEEVNTFLASAK

Sequences:

>Translated_105_residues
MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEVENPDFKFVEVDRDEYMDLAIEWGIMGIPSFVVIEDG
KEKARLVNKLRKTKEEVNTFLASAK
>Mature_105_residues
MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEVENPDFKFVEVDRDEYMDLAIEWGIMGIPSFVVIEDG
KEKARLVNKLRKTKEEVNTFLASAK

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12043; Mature: 12043

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEVENPDFKFVEVDRDEYM
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCHHE
DLAIEWGIMGIPSFVVIEDGKEKARLVNKLRKTKEEVNTFLASAK
EEHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEVENPDFKFVEVDRDEYM
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCHHE
DLAIEWGIMGIPSFVVIEDGKEKARLVNKLRKTKEEVNTFLASAK
EEHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]