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The map label for this gene is ydgF

Identifier: 15672342

GI number: 15672342

Start: 364451

End: 365044

Strand: Reverse

Name: ydgF

Synonym: L164461

Alternate gene names: 15672342

Gene position: 365044-364451 (Counterclockwise)

Preceding gene: 15672347

Following gene: 15672338

Centisome position: 15.43

GC content: 35.19

Gene sequence:

>594_bases
ATGAGTACGAATTTGGAGATTGAGTATAAGTCGCTATTGTCGCTGGCTGAGTATGACCAGCTCAAAAAACTCTTTACTCA
CGTAACCCCTGTTAGGCAAACTAACCACTACTTAGATTCAAAAGATTTTAAATTACGCAAGAAAAAATTGGCTTTGCGTA
TTAGAACTTTTGATAAGTCCGCAGAAATGACTTTAAAAGTTCCGCAAGAAGTTGGAAATATTGAATATAATATTGATCTC
AGTCTTGAAGAAGCTCAACAACTCCTTGGCGAGCGAAATATTGTCTGTGGAGAGACTGATTTAAGTGAAATCTGTGAGTT
ACTAACTGCACGAGATATTAATCTTGAGGAAATCACTTTAATTGGAAGTCTGACGACGATTCGTTATGAGCAACATCTTC
CAATTGGGCTTGCTGCATTAGACAAGAATGATTATCTAGGGCATACTGATTATGAGCTTGAGCTTGAAGTAGATGACAGC
AAACAAGGGAAAAAAGACTTTTTTGACTTTTTAGATAAAAATCGAGTTGAATATCGTTTTTCAAAATCCAAAGTTGTTCG
TTTTTTAGACTGTTTAAGACATTTACGAAAATAA

Upstream 100 bases:

>100_bases
ACTTATAGTCAGCCTTTTGATATACTTTTAATTAATATATCGTTTAACCCAACTGAAAGGAAAGATATTTTCTTTAGAAA
ATTATCTTAAAAATTAATTA

Downstream 100 bases:

>100_bases
TTTTTAAAATTTTACTGACAGAATCCTGTCAGTATTTTTTTATAAAAAAAATGTCTGACAAGCATCAGGCAGTTTTTTCA
ATTTGTTCTAAGTATTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSTNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFKLRKKKLALRIRTFDKSAEMTLKVPQEVGNIEYNIDL
SLEEAQQLLGERNIVCGETDLSEICELLTARDINLEEITLIGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDS
KQGKKDFFDFLDKNRVEYRFSKSKVVRFLDCLRHLRK

Sequences:

>Translated_197_residues
MSTNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFKLRKKKLALRIRTFDKSAEMTLKVPQEVGNIEYNIDL
SLEEAQQLLGERNIVCGETDLSEICELLTARDINLEEITLIGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDS
KQGKKDFFDFLDKNRVEYRFSKSKVVRFLDCLRHLRK
>Mature_196_residues
STNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFKLRKKKLALRIRTFDKSAEMTLKVPQEVGNIEYNIDLS
LEEAQQLLGERNIVCGETDLSEICELLTARDINLEEITLIGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDSK
QGKKDFFDFLDKNRVEYRFSKSKVVRFLDCLRHLRK

Specific function: Unknown

COG id: COG4116

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206
- InterPro:   IPR009195 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 23049; Mature: 22917

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFKLRKKKLALRIRTFDKS
CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHEEEEEECCCC
AEMTLKVPQEVGNIEYNIDLSLEEAQQLLGERNIVCGETDLSEICELLTARDINLEEITL
CCEEEECHHHHCCEEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCHHHEEE
IGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDSKQGKKDFFDFLDKNRVEYRF
EECCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEE
SKSKVVRFLDCLRHLRK
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFKLRKKKLALRIRTFDKS
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHEEEEEECCCC
AEMTLKVPQEVGNIEYNIDLSLEEAQQLLGERNIVCGETDLSEICELLTARDINLEEITL
CCEEEECHHHHCCEEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCHHHEEE
IGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDSKQGKKDFFDFLDKNRVEYRF
EECCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEE
SKSKVVRFLDCLRHLRK
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]