Click here to switch to the map view.

The map label for this gene is ydcG

Identifier: 15672309

GI number: 15672309

Start: 326483

End: 326776

Strand: Direct

Name: ydcG

Synonym: L126409

Alternate gene names: NA

Gene position: 326483-326776 (Clockwise)

Preceding gene: 15672308

Following gene: 15672310

Centisome position: 13.8

GC content: 39.8

Gene sequence:

>294_bases
ATGGAAAATAAAATACGTGAATTGCGCCGATTATCTCATCTTTCACAAGAGGATGTCGCACATATCGCTCACGTCTCGCG
TCAGACGATTAATGCGATTGAAAATGACAAATACGACCCAGAGTTAACGCTTGCTTTCAAACTTGCAGAAACCCTAGGGA
CAACCGTTGATGAGCTTTTTAACTATCAACCAACCGTTGTGAAAAGGAAAGAAAACGATGTATTTTGGTGCGAAAAATAT
CAATGTGTCTTATGGAAAAGAGCAGGTATTGAAAAACGTAACGCTGTCGATTGA

Upstream 100 bases:

>100_bases
ACTTGTAAAAAACTTTTGACAAGCCAATTGTTTGCAAAAGATAATAAAATTTGAATTAAATCTTAAAAAAGAACTTCCAA
AAGAATTAGAAGGGAAAAAC

Downstream 100 bases:

>100_bases
AAAAGGAAAAACGACAGCTATTATTGGAGTCAATGGTTCTGGGAAATCAACGATTTTAAAGGCACTTGGACGTTTAATTA
AATCGGATGGACAGGTTATC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTLAFKLAETLGTTVDELFNYQPTVVKRKENDVFWCEKY
QCVLWKRAGIEKRNAVD

Sequences:

>Translated_97_residues
MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTLAFKLAETLGTTVDELFNYQPTVVKRKENDVFWCEKY
QCVLWKRAGIEKRNAVD
>Mature_97_residues
MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTLAFKLAETLGTTVDELFNYQPTVVKRKENDVFWCEKY
QCVLWKRAGIEKRNAVD

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11419; Mature: 11419

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTLAFKLAETLGTTVDELF
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHH
NYQPTVVKRKENDVFWCEKYQCVLWKRAGIEKRNAVD
CCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTLAFKLAETLGTTVDELF
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHH
NYQPTVVKRKENDVFWCEKYQCVLWKRAGIEKRNAVD
CCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]