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The map label for this gene is napB

Identifier: 15672289

GI number: 15672289

Start: 306480

End: 306959

Strand: Reverse

Name: napB

Synonym: L106489

Alternate gene names: 15672289

Gene position: 306959-306480 (Counterclockwise)

Preceding gene: 15672290

Following gene: 15672288

Centisome position: 12.98

GC content: 31.04

Gene sequence:

>480_bases
GTGATTATGACCAATCTTCAGCAAAATCAGGAACAAATTATGACTTCTTTAACTGATTTATTTAATAAGATTGATGCCTA
TTACAAGCCACAAATGGAGGCTGAATTCTCAAATATTTCGTTATCAGAAATTGAAACGATTGAATTTATTGCTAAAACCC
CTTATCCAAATGTGACCAAATTAGCTCATCATCTCTACATGACACGTGGTGCTGCCAGTAAAATCGCTAAAAAACTGCTC
AAAAAAAATCTCGTTGAATCTTATCAAATTCCTCAAAACAAAAAGGAAATCTATTTTCGCTTAACAAAAGAGGGTCAAGA
AATTAATGACCGTCACGAAAGTTTGCACCAAAAATTTTCAGAAAAGGATCAAGTTATCTTCGATGAATTAACTGATGAGT
CTGTCAGCAATATTTTAAAATTTCTCAATAAATACAATAATCATCTTGATTCTGCTATTCGGAATAATATTGAAAAATAA

Upstream 100 bases:

>100_bases
ACTGGAAAAATGAACAAAATTTTGTGGTTACAAGTATCTGGCGACGCAATGACTATTGGCGCTGTATTTATAGACAGACA
ACTTTAAAAAGAGAGGAAAA

Downstream 100 bases:

>100_bases
TTCTGTCAGTAAATTAATTTTTACTGACAGTTTTTTTGGTTGGTTTTTGGTTGACACGGAAACAATGTTATGATATACTA
TTTTTGTTTCCAGGGAAACT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLL
KKNLVESYQIPQNKKEIYFRLTKEGQEINDRHESLHQKFSEKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK

Sequences:

>Translated_159_residues
MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLL
KKNLVESYQIPQNKKEIYFRLTKEGQEINDRHESLHQKFSEKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK
>Mature_159_residues
MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLL
KKNLVESYQIPQNKKEIYFRLTKEGQEINDRHESLHQKFSEKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK

Specific function: Involved in protein secretion [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18688; Mature: 18688

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
LAHHLYMTRGAASKIAKKLLKKNLVESYQIPQNKKEIYFRLTKEGQEINDRHESLHQKFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
EKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
LAHHLYMTRGAASKIAKKLLKKNLVESYQIPQNKKEIYFRLTKEGQEINDRHESLHQKFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
EKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]