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The map label for this gene is ydaE

Identifier: 15672290

GI number: 15672290

Start: 306956

End: 308233

Strand: Reverse

Name: ydaE

Synonym: L106965

Alternate gene names: 15672290

Gene position: 308233-306956 (Counterclockwise)

Preceding gene: 30023986

Following gene: 15672289

Centisome position: 13.03

GC content: 36.23

Gene sequence:

>1278_bases
ATGGCAGCTTCAAGTACAAACAATCTGAAACTCGCTGAAAAAGGAGTTTGGGTTTCTATTATCGCTTATATTGTTTTATC
CATTGGACAAATTGCTTTTGCAGCAATTGTGCATTCTAGTGCTCTTCAAGCTAATGGTTTTAATAATGTGACTGATATTA
TGGGAAATATTGCAATTTTGATTGGTCTTCGACTTGCTCGAATTCCAGCAGATAGTGATCATGTTTATGGTCACTGGAAA
ATTGAGTCAATCGCTAGCTTAATTTCTAGTTTTATCATGTTTTTCGTTGGTTTTGAGGTTTTAAGAGAAACAGTTATGAC
ACTTCTTTCTGGTAAAGAAGAAGCCATAGACCCACTGGGAGCTCTTGTTGGTCTATTCTCAGCTTTTGTCATGCTGGGCG
TTTATCTTTATAATCGGGCATTGGCTAAAAAAACGAACTCACAAGCGCTGTCAGCAGCAAGTAAGGACAATCTCTCTGAT
GCGGTGACTTCTATTGGAACTGTGGTTGCTATTTTAGCAAGTAGTGTAGGCTGGGAGTGGCTTGATACTGCGATGGCTGT
AGTTATTTGTGGTTTCATTTTAAAGACTGCTTATGATATTTTCCATGAATCTGTTTTTAGTCTCTCTGATGGTTTTGATG
AAAATCTTGTCGAAGAATATCGCGAAGCAATTTGCTTAGTTCCAAAGGTAAAAGGGGTTAAGCTTGTCCGAGGTCGTTCT
TATGGAAGTAATATTTTCCTTGATGTAGTGGTTGAAATGTCTCCTGATTTAAGTGTTTTCGAAAGTCATGAAGCGACCGA
GTTCATTGAGAAAATGTTAATTGACAATTATGGTGTTTATGATGTCGATGTCCACGTTGAACCTGCTGCCTTACCTGAAG
AGGAACATTACGCCAGTCGCTCACTTGAACTTTTGGCAAAAGAAGAACAGTTTTTAAATCTGGAAAATTTGGACAAATTA
ACTGACAGCACTTTTCAAGAAATTCTTGCTGATGGAAAAATCATCAGTGCTTCTGATAAATTGATAGATTTTGCAAAAAT
TACTGACGAAAATTCTGTCAGTAAAAATAATAACTCTAAAAATTCATTGACAAGTCTGTCAGTAATTCCATTAGCAATAA
ATCACTATAGTAGTTCACAAGTCAGCAAGAAAACATTTATTTTAACTTATGATTACTGGAAAAATGAACAAAATTTTGTG
GTTACAAGTATCTGGCGACGCAATGACTATTGGCGCTGTATTTATAGACAGACAACTTTAAAAAGAGAGGAAAAGTGA

Upstream 100 bases:

>100_bases
TTTTGTGAGCCCTTGTTATAAAAGCATTTTTTGGCAATAGATACAAACTTTCATTCAAAATTTTGTTATAATGGAATGAT
GTAAATTTGGGAGGATTCAT

Downstream 100 bases:

>100_bases
TTATGACCAATCTTCAGCAAAATCAGGAACAAATTATGACTTCTTTAACTGATTTATTTAATAAGATTGATGCCTATTAC
AAGCCACAAATGGAGGCTGA

Product: cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MAASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQANGFNNVTDIMGNIAILIGLRLARIPADSDHVYGHWK
IESIASLISSFIMFFVGFEVLRETVMTLLSGKEEAIDPLGALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSD
AVTSIGTVVAILASSVGWEWLDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVEEYREAICLVPKVKGVKLVRGRS
YGSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDNYGVYDVDVHVEPAALPEEEHYASRSLELLAKEEQFLNLENLDKL
TDSTFQEILADGKIISASDKLIDFAKITDENSVSKNNNSKNSLTSLSVIPLAINHYSSSQVSKKTFILTYDYWKNEQNFV
VTSIWRRNDYWRCIYRQTTLKREEK

Sequences:

>Translated_425_residues
MAASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQANGFNNVTDIMGNIAILIGLRLARIPADSDHVYGHWK
IESIASLISSFIMFFVGFEVLRETVMTLLSGKEEAIDPLGALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSD
AVTSIGTVVAILASSVGWEWLDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVEEYREAICLVPKVKGVKLVRGRS
YGSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDNYGVYDVDVHVEPAALPEEEHYASRSLELLAKEEQFLNLENLDKL
TDSTFQEILADGKIISASDKLIDFAKITDENSVSKNNNSKNSLTSLSVIPLAINHYSSSQVSKKTFILTYDYWKNEQNFV
VTSIWRRNDYWRCIYRQTTLKREEK
>Mature_424_residues
AASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQANGFNNVTDIMGNIAILIGLRLARIPADSDHVYGHWKI
ESIASLISSFIMFFVGFEVLRETVMTLLSGKEEAIDPLGALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSDA
VTSIGTVVAILASSVGWEWLDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVEEYREAICLVPKVKGVKLVRGRSY
GSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDNYGVYDVDVHVEPAALPEEEHYASRSLELLAKEEQFLNLENLDKLT
DSTFQEILADGKIISASDKLIDFAKITDENSVSKNNNSKNSLTSLSVIPLAINHYSSSQVSKKTFILTYDYWKNEQNFVV
TSIWRRNDYWRCIYRQTTLKREEK

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=259, Percent_Identity=26.6409266409266, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 47256; Mature: 47125

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQANGFNNVTDIMGNIAIL
CCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IGLRLARIPADSDHVYGHWKIESIASLISSFIMFFVGFEVLRETVMTLLSGKEEAIDPLG
HHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSDAVTSIGTVVAILASSVGWEW
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
LDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVEEYREAICLVPKVKGVKLVRGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCEEEEECCC
YGSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDNYGVYDVDVHVEPAALPEEEHYASR
CCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHH
SLELLAKEEQFLNLENLDKLTDSTFQEILADGKIISASDKLIDFAKITDENSVSKNNNSK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCCCCCC
NSLTSLSVIPLAINHYSSSQVSKKTFILTYDYWKNEQNFVVTSIWRRNDYWRCIYRQTTL
CHHHHHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEHHHHHH
KREEK
HCCCC
>Mature Secondary Structure 
AASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQANGFNNVTDIMGNIAIL
CCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IGLRLARIPADSDHVYGHWKIESIASLISSFIMFFVGFEVLRETVMTLLSGKEEAIDPLG
HHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSDAVTSIGTVVAILASSVGWEW
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
LDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVEEYREAICLVPKVKGVKLVRGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCEEEEECCC
YGSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDNYGVYDVDVHVEPAALPEEEHYASR
CCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHH
SLELLAKEEQFLNLENLDKLTDSTFQEILADGKIISASDKLIDFAKITDENSVSKNNNSK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCCCCCCC
NSLTSLSVIPLAINHYSSSQVSKKTFILTYDYWKNEQNFVVTSIWRRNDYWRCIYRQTTL
CHHHHHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEHHHHHH
KREEK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377; 8951816 [H]