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The map label for this gene is yagB

Identifier: 15672047

GI number: 15672047

Start: 66497

End: 67147

Strand: Reverse

Name: yagB

Synonym: L1008

Alternate gene names: 15672047

Gene position: 67147-66497 (Counterclockwise)

Preceding gene: 15672048

Following gene: 15672046

Centisome position: 2.84

GC content: 31.49

Gene sequence:

>651_bases
TTGATTGATTTAAAGAAAATTAAAAGATTTGCTCAAGAAATTCATGATAAAAATAATGATGGACATGGCTTTGACCATAT
TGAACGGGTCGTTGCTCTTGCTCGAAAAATTTTACTGACAGAGCCGTCAGCAAATCAAGAACTTGTTCTAGCAACTTGTT
ATTTACATGATACTTATGATGAAAAATTAACAGATGATGTTCCTAAACAAAAAGTTAAAGTTGCGCAATTTTTAAATGAG
CTTAAAATTGATAAAAAGCTCATTGATGAACTTTTTATGATTATTGACAACATGAGTTTTTCAAGTAATTTAATTGAGAG
AAAAACACTCTCTTTGAATGGACAAATTGTGCAAGATGCTGACCGCCTTGATGCAATGGGAGCTTGGGGAATTGTAAGGA
CACTTGAATATGGTTGGGCAAAAAATCGAGTCTTTTATGACCCAAATCTGCCACCTTTAGATTACAATTCTAAAGAAGAC
TATCATAGTCAAAAAAATAACTCCACACTCAATCATTTTTATGAAAAATTATTTTTGTTAAAAGATTTATTAAATACAAC
CGAAGGAAAAAGACTAGGCGAAAAGCGTGATAAAATAATGCACCTTTTTGTCAGCCAAATCGAAGAAGAATACAAGGAAA
CTCATCTTTAA

Upstream 100 bases:

>100_bases
ACTTCCTTAGCCTTACTAATCTTGAGGATTTACCAGTTTACACTATTTGGTTTTAGTTGACACTGGTGTAAACTCAAGTT
ATTTATTTTGGAGATTTAAC

Downstream 100 bases:

>100_bases
TTTTTACTGACAGACCCTATCAGTGCTTCTTTTATGGCCTTGTCAGTAAAAATTATTCTCAAATCGAAAGGAAGTGACTA
ATGTCCGGCTTCACAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSANQELVLATCYLHDTYDEKLTDDVPKQKVKVAQFLNE
LKIDKKLIDELFMIIDNMSFSSNLIERKTLSLNGQIVQDADRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKED
YHSQKNNSTLNHFYEKLFLLKDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL

Sequences:

>Translated_216_residues
MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSANQELVLATCYLHDTYDEKLTDDVPKQKVKVAQFLNE
LKIDKKLIDELFMIIDNMSFSSNLIERKTLSLNGQIVQDADRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKED
YHSQKNNSTLNHFYEKLFLLKDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL
>Mature_216_residues
MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSANQELVLATCYLHDTYDEKLTDDVPKQKVKVAQFLNE
LKIDKKLIDELFMIIDNMSFSSNLIERKTLSLNGQIVQDADRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKED
YHSQKNNSTLNHFYEKLFLLKDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=205, Percent_Identity=25.8536585365854, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25298; Mature: 25298

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSANQELVLATCYLHDTYD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHH
EKLTDDVPKQKVKVAQFLNELKIDKKLIDELFMIIDNMSFSSNLIERKTLSLNGQIVQDA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
DRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKEDYHSQKNNSTLNHFYEKLFLL
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
KDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSANQELVLATCYLHDTYD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCHH
EKLTDDVPKQKVKVAQFLNELKIDKKLIDELFMIIDNMSFSSNLIERKTLSLNGQIVQDA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
DRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKEDYHSQKNNSTLNHFYEKLFLL
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
KDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]