| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834900
GI number: 15834900
Start: 334728
End: 335522
Strand: Reverse
Name: Not Available
Synonym: TC0280
Alternate gene names: 15834900
Gene position: 335522-334728 (Counterclockwise)
Preceding gene: 15834903
Following gene: 15834899
Centisome position: 31.27
GC content: 43.14
Gene sequence:
>795_bases ATGTTTGTAGGTATGATGTATTACACCACACCTCTGTTGGAGATAGCCTTAATTTGGATTGTCCTTAATTACTTACTAAA GTTTTTCTGGGGAACAGCGGCCATGGACCTGGTCTTTGGCTTACTTTCTTTTCTCAGTTTGTTCGTTCTTTCAGAAAAAC TGCATCTCCCAGTTATCCGTAATTTGATGCTCCGTGTAGTAAATATTGCGGCAATCGTGGTGTTCATTATTTTCCAGCCT GAAATTCGTCTTGCACTATCTAGGGTGCGCTTGCGCAGAGGGAATTTTGTAGTTAACATGCAGAACGAATTCATCGACCA TTTGACAAGCTGCATTTATCGCATGTCTGAGCGACAAATTGGAGCTCTTATTGTGTTAGAGAACGAACATCTTGTAAATG AACTACTTTCTCTCTCTGCTGTGAAAATCAACGCTGTCTTTTCTGAAGAACTTCTTGAAGCTATCTTTGAGCCGTCTTCC CATCTACATGATGGAGCAGTCCTAATGCAAGGAGAAACTATTTCCTATGCAAGAGTGATTCTTCCTCTTGCTCATGACAC TACACAACTCTCGCGCTCCATGGGGACTCGCCATCGAGCAGCACTTGGGGCTAGCCAACGCACCGACGCTCTCATAATCG TTGTGTCAGAAGAGACCGGAGCAGTTTCTTTAGCACGAGACGGAGTCTTAACTCGCGGAGTGAAGCCAGATAGATTTAAA GCCATCTTACGAAGTATCCTAACACGCAATGAAAGAAAAACAAACCCTATTATCTCCTGGATGCGTAAAAAATGA
Upstream 100 bases:
>100_bases TTATTAAGACCTCCATTGAACTCGATTCGTCCGCGATAATTTTCAAGGATTTTACTAAGAAATAATGAAAACACTTCAAC AGCTAGGGTTATCTTAATAA
Downstream 100 bases:
>100_bases TCCCTTTCGTCTCGTGGATTTCACATAATTGGTTACAAAAACTTGTTTCTTTAGGTTTTGCCATTATTATCTGGGTATTA GCTAATCAGTCTATGACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MFVGMMYYTTPLLEIALIWIVLNYLLKFFWGTAAMDLVFGLLSFLSLFVLSEKLHLPVIRNLMLRVVNIAAIVVFIIFQP EIRLALSRVRLRRGNFVVNMQNEFIDHLTSCIYRMSERQIGALIVLENEHLVNELLSLSAVKINAVFSEELLEAIFEPSS HLHDGAVLMQGETISYARVILPLAHDTTQLSRSMGTRHRAALGASQRTDALIIVVSEETGAVSLARDGVLTRGVKPDRFK AILRSILTRNERKTNPIISWMRKK
Sequences:
>Translated_264_residues MFVGMMYYTTPLLEIALIWIVLNYLLKFFWGTAAMDLVFGLLSFLSLFVLSEKLHLPVIRNLMLRVVNIAAIVVFIIFQP EIRLALSRVRLRRGNFVVNMQNEFIDHLTSCIYRMSERQIGALIVLENEHLVNELLSLSAVKINAVFSEELLEAIFEPSS HLHDGAVLMQGETISYARVILPLAHDTTQLSRSMGTRHRAALGASQRTDALIIVVSEETGAVSLARDGVLTRGVKPDRFK AILRSILTRNERKTNPIISWMRKK >Mature_264_residues MFVGMMYYTTPLLEIALIWIVLNYLLKFFWGTAAMDLVFGLLSFLSLFVLSEKLHLPVIRNLMLRVVNIAAIVVFIIFQP EIRLALSRVRLRRGNFVVNMQNEFIDHLTSCIYRMSERQIGALIVLENEHLVNELLSLSAVKINAVFSEELLEAIFEPSS HLHDGAVLMQGETISYARVILPLAHDTTQLSRSMGTRHRAALGASQRTDALIIVVSEETGAVSLARDGVLTRGVKPDRFK AILRSILTRNERKTNPIISWMRKK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 29933; Mature: 29933
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVGMMYYTTPLLEIALIWIVLNYLLKFFWGTAAMDLVFGLLSFLSLFVLSEKLHLPVIR CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NLMLRVVNIAAIVVFIIFQPEIRLALSRVRLRRGNFVVNMQNEFIDHLTSCIYRMSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC GALIVLENEHLVNELLSLSAVKINAVFSEELLEAIFEPSSHLHDGAVLMQGETISYARVI CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH LPLAHDTTQLSRSMGTRHRAALGASQRTDALIIVVSEETGAVSLARDGVLTRGVKPDRFK HHHCCCHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHCCHHHCCCCHHHHH AILRSILTRNERKTNPIISWMRKK HHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MFVGMMYYTTPLLEIALIWIVLNYLLKFFWGTAAMDLVFGLLSFLSLFVLSEKLHLPVIR CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NLMLRVVNIAAIVVFIIFQPEIRLALSRVRLRRGNFVVNMQNEFIDHLTSCIYRMSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC GALIVLENEHLVNELLSLSAVKINAVFSEELLEAIFEPSSHLHDGAVLMQGETISYARVI CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH LPLAHDTTQLSRSMGTRHRAALGASQRTDALIIVVSEETGAVSLARDGVLTRGVKPDRFK HHHCCCHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHCCHHHCCCCHHHHH AILRSILTRNERKTNPIISWMRKK HHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]