| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834903
GI number: 15834903
Start: 338280
End: 339584
Strand: Reverse
Name: Not Available
Synonym: TC0283
Alternate gene names: 15834903
Gene position: 339584-338280 (Counterclockwise)
Preceding gene: 15834906
Following gene: 15834900
Centisome position: 31.65
GC content: 40.38
Gene sequence:
>1305_bases ATGAAAAAAACCTCCGTTATCGACACTAGCGTTTTTATTTATGACCCTGAGGCTCTCTCCTCTTTTTCCAATACTCGCAT TATCGTTCCTTTCACGGTAATTGAAGAGCTAGAATCTTGCGCTAAATTCCGTGATGAATCGGGGAAAAATGCTTCTCGAG CATTAAGTCATATTCGTTTGCTACTGGAACAATCAGAAAAACCCACTACTGGGCAGATTTTATTAAAAAATGGTAGCGAG TTATGTATAGAAGTTTCTCCTCTTGCAAATCTTTCAAACAGTGAGAAGCAAAAAAAACACCTCACTCTAGAATTACTTCA AATCATTTCTCAAAGAGAACCTGTTGTTTTTGTAACTAAAAGTCTTGGACGACGAGTCCATGCAGAGGCTTTGGGTATTG AATCCAAAGATTACGAAAACAAATGCGTATCGTTTCGCTCCCTTTATCGTGGCCACAGAAAACTCAAAGTATCTAATAGC AAGATCGAATACTTTTATAAGGACGGAGCGATAGCCCTCCCCTCCGATCTCTCCTCCCCACCTTCTCCCAATGAGTACTT TTTCCTTTCAGGAGATGATGAAACCCATTCCGCTTGTGGTCGTTTTAGTCCTAATGATCAAAAAATTATAGCACTAAAAC CTTCCCCAGAAAAAATTTGGGGAGTTAAACCTCTTAACATAGAACAACGCTGCGCATTAGATCTATTGCTAAGAGATGAC ATTAAACTCGTTACACTAATGGGACAAGCTGGATCAGGGAAAACTATCCTAGCTTTAGCAGCGGCTATGTATCAAGTTTT CGAAAACCCCAAATATAATAAGCTGCTGGTTAGCAGACCTATTATTCCTATGGGGAAAGATATTGGATTTCTTCCCGGAA TAAAAGAAGAAAAACTCATGCACTGGATGCAGCCTATCTATGATAATATGGAATTCCTGTTCGATGTCAATCATATGGGG GATTTTGCAGAAACCCTCCACAGCTTAATGGAAACCAAAAAACTAGAGATGGAAGCACTGACCTATATTCGGGGACGCTC CCTACCTAAGGTATTTATGATCATTGATGAAGCGCAAAACCTCACCCCTCATGAAGTCAAAACAATCATTTCTCGAGCAG GGAAGGGAACAAAAATCGTTTTAACAGGAGATCCCACTCAAATAGATAGTTTGTACTTTGACGAAAACTCCAATGGCCTT ACCTATCTGGTAGGAAAATTTCGCCACTTGCCTTTATACGGGCATATGTTCATGACTAGAACTGAACGTTCTGAACTCGC AGCAGCAGCAGCGACACTGCTTTAA
Upstream 100 bases:
>100_bases CTTGTTTTCCCTATCTAATAAAGACATGTTTTAATTTTTATTAATATGATACACATCGAAGTAGTTTACCTCTTACCATC GAGTGAATTAGGAACTTGTA
Downstream 100 bases:
>100_bases CTATTTTCAACAAAATCTGTTTCCCCCACTGCTTCCTGTCTTCAGAAATATAGAGCTTTTAACAAGCCCTATATTTCTGA CAGTAGCAACCATTCAATAA
Product: PhoH-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKNASRALSHIRLLLEQSEKPTTGQILLKNGSE LCIEVSPLANLSNSEKQKKHLTLELLQIISQREPVVFVTKSLGRRVHAEALGIESKDYENKCVSFRSLYRGHRKLKVSNS KIEYFYKDGAIALPSDLSSPPSPNEYFFLSGDDETHSACGRFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDD IKLVTLMGQAGSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLMHWMQPIYDNMEFLFDVNHMG DFAETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQNLTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGL TYLVGKFRHLPLYGHMFMTRTERSELAAAAATLL
Sequences:
>Translated_434_residues MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKNASRALSHIRLLLEQSEKPTTGQILLKNGSE LCIEVSPLANLSNSEKQKKHLTLELLQIISQREPVVFVTKSLGRRVHAEALGIESKDYENKCVSFRSLYRGHRKLKVSNS KIEYFYKDGAIALPSDLSSPPSPNEYFFLSGDDETHSACGRFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDD IKLVTLMGQAGSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLMHWMQPIYDNMEFLFDVNHMG DFAETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQNLTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGL TYLVGKFRHLPLYGHMFMTRTERSELAAAAATLL >Mature_434_residues MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKNASRALSHIRLLLEQSEKPTTGQILLKNGSE LCIEVSPLANLSNSEKQKKHLTLELLQIISQREPVVFVTKSLGRRVHAEALGIESKDYENKCVSFRSLYRGHRKLKVSNS KIEYFYKDGAIALPSDLSSPPSPNEYFFLSGDDETHSACGRFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDD IKLVTLMGQAGSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLMHWMQPIYDNMEFLFDVNHMG DFAETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQNLTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGL TYLVGKFRHLPLYGHMFMTRTERSELAAAAATLL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=148, Percent_Identity=31.7567567567568, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI145693103, Length=168, Percent_Identity=36.3095238095238, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 48836; Mature: 48836
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKNASRALSHIRL CCCCCEEEEEEEEECHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LLEQSEKPTTGQILLKNGSELCIEVSPLANLSNSEKQKKHLTLELLQIISQREPVVFVTK HHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEH SLGRRVHAEALGIESKDYENKCVSFRSLYRGHRKLKVSNSKIEYFYKDGAIALPSDLSSP HHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEECCCCCCCC PSPNEYFFLSGDDETHSACGRFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDD CCCCEEEEECCCCCHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCC IKLVTLMGQAGSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLM EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH HWMQPIYDNMEFLFDVNHMGDFAETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQN HHHHHHHCCCEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC LTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGLTYLVGKFRHLPLYGHMFMTR CCHHHHHHHHHHCCCCCEEEEECCCCEECEEEEECCCCCEEEEEECCCCCCEEHHHEEEE TERSELAAAAATLL CHHHHHHHHHHHCC >Mature Secondary Structure MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKNASRALSHIRL CCCCCEEEEEEEEECHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LLEQSEKPTTGQILLKNGSELCIEVSPLANLSNSEKQKKHLTLELLQIISQREPVVFVTK HHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEH SLGRRVHAEALGIESKDYENKCVSFRSLYRGHRKLKVSNSKIEYFYKDGAIALPSDLSSP HHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEECCCCCCCC PSPNEYFFLSGDDETHSACGRFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDD CCCCEEEEECCCCCHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHCCC IKLVTLMGQAGSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLM EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH HWMQPIYDNMEFLFDVNHMGDFAETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQN HHHHHHHCCCEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC LTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGLTYLVGKFRHLPLYGHMFMTR CCHHHHHHHHHHCCCCCEEEEECCCCEECEEEEECCCCCEEEEEECCCCCCEEHHHEEEE TERSELAAAAATLL CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]