| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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The map label for this gene is pmpG-2
Identifier: 15834887
GI number: 15834887
Start: 318745
End: 321348
Strand: Reverse
Name: pmpG-2
Synonym: TC0267
Alternate gene names: 15834887
Gene position: 321348-318745 (Counterclockwise)
Preceding gene: 15834889
Following gene: 15834882
Centisome position: 29.95
GC content: 41.01
Gene sequence:
>2604_bases ATGCGACCAGATCATGTGAACTTATGTTGCCTATGTGCCACTATTCTCTCCCCAACAGCAATCCTCTTTGGTCAGGATGC GTTAGATAAATCCGCTCTTATTACTAAAAATCCTAACAGCATCGTCTGTACATTTTTGGAAGACTGCACCATGGAGAACT TTTCTCCTGCTCTTCTCTCTCATGCACGACAAGATGATCCGCTATACATAATAGGAAATACCCATAACTGGTTCGTATCC AATCTCCACCCCTCAACCAATGAAGAGCGGTTTCTTAAAGAAAAAGGCGATCTTTCTATTCAAGACTTTCGATTTCTTTC ATTTACGGATTGTTCTTCCTCTACAGAAGACTCCCCTTCTATCCTCTACCATAAAAATGGGCAGCTATTCCTAAGAAATA ATGGAAACATGAGCTTTTATCGCAATCATTCCGAAGGCTCTGGAGGAGCACTCTCCACAGACGCATTGTTCCTACAACAC AACTATCTTTTCACAAATTTTGAAGAAAATTCTTCTGCAAAAAATGGCGGTGCCATTCAAGCTCAAACTCTTTCTTTGTC AAGAAATGTCTCTTCTCTTTCTTTTTCCCGTAATCGCGCAAATCTGAATGGAGGAGCTATTTGTTGCCAAAATCTCATTT GTTCAGGAAATGTTAACCCTCTCTTTTTCACCAATAACTCTGCCTTAAATGGAGGAGCTATTTGTTGTATAAATGAACAA AATCTCTCAGAAAAAGGATGCCTCTCCTTGGCATATAACCAAGAGACTCTATTTTCAGGCAATTCAGCGAAGGAAAAGGG GGGAGCCATTTACACAAAACATATGGTTTTGCGTCACAATGGACCCGTTTCCTTCGTAAATAACAGTGCTAAATTAGGGG GAGCTATTGCTATCCAGTCAGGAGGAAGTCTCTCCATCATTGCAGGGGGAGGCTCTGTCCTTTTCCAAAATAACTCCTGT CATTTCTCTGATCAAGGTACGGTAAGAAATGCGATTTACTTAGAGAAAAATGCTCTGCTCTCTTCTTTGGAAGCTCGCCA TGGGGATATCCTTTTCTTTGATCCCATTGTGCAAGAAGTCGTAAGTCCTGAATTCTCTACTACCTCAGCTCTAACGCCTT TACGCATTCAGACAAACACAAACCGTGCTGTTATTTTTTCTAGTGAAAATCTATCCAAAGAAGAGAAAACCGAAGCCAAT CTTATTTCTAAGATACAACAGCCAATCGAGCTGCAATCTGGATGTTTAGTCTTAAAAGACCGAGTCATTCTTTCTGCACC GTCTCTTTCCCAAGCCCCCCAAGCTCTCTTAGTGATGGATGTAGGGACTTCTTTAACAACATCTTCGGACTTGAAATTAA CCACTCTAAGCATTCCTCTTCATTCTATAGATACAGAAAATAGTGTCTCTATCCAATCTCCAACTCTTTCTATCCAAAAA ATCTTTCTTTCTAATTCAGAGCATGAAAATTTTTATGAGAATGTAGAGCTATTAAGCAAAGATCAAAAAGACATCCCTCT TCTCTCTCTTCCAAAAGGGTTGCCCCATCCAGATCTTCCTGATGGGAATCTTTCTTCTCACTTTGGATATCAAGGGGATT GGAATTTTTCTTGGCAAACATCCGATCAGAGAGAAACCTTAGTTGCTAACTGGACAGCTAATAGCTACATACCACACCCC GAGCGTCAATCTGCGTTAGTTGCAAATACTCTTTGGAATACGTACTCTGACATGCAAGCTGTACAATCCATGATTAATAC AACTGCTCAAGGAGGAGCCTATCTATTTGGAACCTGGGGATCTGCCGTTTCTAATCTATTCTATTCACATGGCAACTCAG GAAAATCTACAGACAACTGGAAACATAGAAGTCTTGGTTACCTCTTTGGTATTAGCACGCATAGCCTAGACGACCACTCT TTCTGCTTAGCTGCTGGACAATTATTCGGGAAATCTTCAGATTCTTTTGTTACGTCTGCGGACACCACTTCTTATATAGC AGCTATACAAACACAAATAGCTACCTCTTTAATAAAAATCTCTGCACAGGCCTGCTATAATGAAAGCATCCACGAACTAA AAACAAAATACCGCTCTTTCTCTAAAGAAGGTTTCGGTGCATGGCACAGCGTCGCGGTATCCGGAGAGATCGGTGCATCC ATACCTATTGTATCCAATGGATCTGGACTTTTTAGTTCTTTCTCTATCTTTTCTAAACTACAAGGATTTTCAGGAAAACA AGATGGCTTTGAAGAAAGTCGGGGTGAAGCTCGGGCCTTTGCTGATAGCTCGTTCACTAATATTTCGCTTCCTGTAGGAA TAGCATTCGAGAAGAAATCTCAAAAAACTCGAAACTACTACCACTTTCTAGGAGCCTACATTCAGGATCTAAAACGCTGT GTAGAATCGGGGCCCGTAACGCTACTCAAAAATTCAGTTACTTGGGATGCTCCTATGGCAAATCTAGATTCGCGAGCATG GATGTTCCGCCTCACGAATCAAAGAGCTTTACATAGATTCCAGACACTTGTGAATATGTCTTATATGCTACGTGGGCAGA GCTATAGTTACTCTTTGGATTTGGGAACTACTTACAGATTCTAG
Upstream 100 bases:
>100_bases TTATATTTAGAGACTTAGACAACACTCTTTTAGGAAAAGTCTGTAAATTATTACTTTTTTTTGACATAAACTCTTCTTTT AGACTCTTAAGGGTAACCCC
Downstream 100 bases:
>100_bases TCTACTACCCCAGTCTCACTTGCATTTTTATGAAAAGTCTTAGAGATTTTTTCCCTAAGGCTTTTCATTTTCCTTTAAAG AAAGATATTAGGTTCTGTTA
Product: polymorphic membrane protein G family protein
Products: NA
Alternate protein names: Polymorphic membrane protein I
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MRPDHVNLCCLCATILSPTAILFGQDALDKSALITKNPNSIVCTFLEDCTMENFSPALLSHARQDDPLYIIGNTHNWFVS NLHPSTNEERFLKEKGDLSIQDFRFLSFTDCSSSTEDSPSILYHKNGQLFLRNNGNMSFYRNHSEGSGGALSTDALFLQH NYLFTNFEENSSAKNGGAIQAQTLSLSRNVSSLSFSRNRANLNGGAICCQNLICSGNVNPLFFTNNSALNGGAICCINEQ NLSEKGCLSLAYNQETLFSGNSAKEKGGAIYTKHMVLRHNGPVSFVNNSAKLGGAIAIQSGGSLSIIAGGGSVLFQNNSC HFSDQGTVRNAIYLEKNALLSSLEARHGDILFFDPIVQEVVSPEFSTTSALTPLRIQTNTNRAVIFSSENLSKEEKTEAN LISKIQQPIELQSGCLVLKDRVILSAPSLSQAPQALLVMDVGTSLTTSSDLKLTTLSIPLHSIDTENSVSIQSPTLSIQK IFLSNSEHENFYENVELLSKDQKDIPLLSLPKGLPHPDLPDGNLSSHFGYQGDWNFSWQTSDQRETLVANWTANSYIPHP ERQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWGSAVSNLFYSHGNSGKSTDNWKHRSLGYLFGISTHSLDDHS FCLAAGQLFGKSSDSFVTSADTTSYIAAIQTQIATSLIKISAQACYNESIHELKTKYRSFSKEGFGAWHSVAVSGEIGAS IPIVSNGSGLFSSFSIFSKLQGFSGKQDGFEESRGEARAFADSSFTNISLPVGIAFEKKSQKTRNYYHFLGAYIQDLKRC VESGPVTLLKNSVTWDAPMANLDSRAWMFRLTNQRALHRFQTLVNMSYMLRGQSYSYSLDLGTTYRF
Sequences:
>Translated_867_residues MRPDHVNLCCLCATILSPTAILFGQDALDKSALITKNPNSIVCTFLEDCTMENFSPALLSHARQDDPLYIIGNTHNWFVS NLHPSTNEERFLKEKGDLSIQDFRFLSFTDCSSSTEDSPSILYHKNGQLFLRNNGNMSFYRNHSEGSGGALSTDALFLQH NYLFTNFEENSSAKNGGAIQAQTLSLSRNVSSLSFSRNRANLNGGAICCQNLICSGNVNPLFFTNNSALNGGAICCINEQ NLSEKGCLSLAYNQETLFSGNSAKEKGGAIYTKHMVLRHNGPVSFVNNSAKLGGAIAIQSGGSLSIIAGGGSVLFQNNSC HFSDQGTVRNAIYLEKNALLSSLEARHGDILFFDPIVQEVVSPEFSTTSALTPLRIQTNTNRAVIFSSENLSKEEKTEAN LISKIQQPIELQSGCLVLKDRVILSAPSLSQAPQALLVMDVGTSLTTSSDLKLTTLSIPLHSIDTENSVSIQSPTLSIQK IFLSNSEHENFYENVELLSKDQKDIPLLSLPKGLPHPDLPDGNLSSHFGYQGDWNFSWQTSDQRETLVANWTANSYIPHP ERQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWGSAVSNLFYSHGNSGKSTDNWKHRSLGYLFGISTHSLDDHS FCLAAGQLFGKSSDSFVTSADTTSYIAAIQTQIATSLIKISAQACYNESIHELKTKYRSFSKEGFGAWHSVAVSGEIGAS IPIVSNGSGLFSSFSIFSKLQGFSGKQDGFEESRGEARAFADSSFTNISLPVGIAFEKKSQKTRNYYHFLGAYIQDLKRC VESGPVTLLKNSVTWDAPMANLDSRAWMFRLTNQRALHRFQTLVNMSYMLRGQSYSYSLDLGTTYRF >Mature_867_residues MRPDHVNLCCLCATILSPTAILFGQDALDKSALITKNPNSIVCTFLEDCTMENFSPALLSHARQDDPLYIIGNTHNWFVS NLHPSTNEERFLKEKGDLSIQDFRFLSFTDCSSSTEDSPSILYHKNGQLFLRNNGNMSFYRNHSEGSGGALSTDALFLQH NYLFTNFEENSSAKNGGAIQAQTLSLSRNVSSLSFSRNRANLNGGAICCQNLICSGNVNPLFFTNNSALNGGAICCINEQ NLSEKGCLSLAYNQETLFSGNSAKEKGGAIYTKHMVLRHNGPVSFVNNSAKLGGAIAIQSGGSLSIIAGGGSVLFQNNSC HFSDQGTVRNAIYLEKNALLSSLEARHGDILFFDPIVQEVVSPEFSTTSALTPLRIQTNTNRAVIFSSENLSKEEKTEAN LISKIQQPIELQSGCLVLKDRVILSAPSLSQAPQALLVMDVGTSLTTSSDLKLTTLSIPLHSIDTENSVSIQSPTLSIQK IFLSNSEHENFYENVELLSKDQKDIPLLSLPKGLPHPDLPDGNLSSHFGYQGDWNFSWQTSDQRETLVANWTANSYIPHP ERQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWGSAVSNLFYSHGNSGKSTDNWKHRSLGYLFGISTHSLDDHS FCLAAGQLFGKSSDSFVTSADTTSYIAAIQTQIATSLIKISAQACYNESIHELKTKYRSFSKEGFGAWHSVAVSGEIGAS IPIVSNGSGLFSSFSIFSKLQGFSGKQDGFEESRGEARAFADSSFTNISLPVGIAFEKKSQKTRNYYHFLGAYIQDLKRC VESGPVTLLKNSVTWDAPMANLDSRAWMFRLTNQRALHRFQTLVNMSYMLRGQSYSYSLDLGTTYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PMPI_CHLMU (Q9PL41)
Other databases:
- EMBL: AE002160 - PIR: F81721 - RefSeq: NP_296646.1 - ProteinModelPortal: Q9PL41 - GeneID: 1246437 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0267 - TIGR: TC_0267 - HOGENOM: HBG413907 - OMA: QKTRNYY - ProtClustDB: CLSK871651 - BioCyc: CMUR243161:TC_0267-MONOMER - InterPro: IPR005546 - InterPro: IPR003368 - InterPro: IPR011427 - SMART: SM00869 - TIGRFAMs: TIGR01376
Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M; SSF103515 Auto_transptbeta
EC number: NA
Molecular weight: Translated: 95019; Mature: 95019
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS51208 AUTOTRANSPORTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDHVNLCCLCATILSPTAILFGQDALDKSALITKNPNSIVCTFLEDCTMENFSPALLS CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCEEEEEEHHCCCCCCCHHHHH HARQDDPLYIIGNTHNWFVSNLHPSTNEERFLKEKGDLSIQDFRFLSFTDCSSSTEDSPS HCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC ILYHKNGQLFLRNNGNMSFYRNHSEGSGGALSTDALFLQHNYLFTNFEENSSAKNGGAIQ EEEECCCEEEEEECCCEEEEECCCCCCCCCEECCEEEEEECEEEEECCCCCCCCCCCEEE AQTLSLSRNVSSLSFSRNRANLNGGAICCQNLICSGNVNPLFFTNNSALNGGAICCINEQ EEEEEECCCCCHHEECCCCCCCCCCHHEEHHHEECCCCCEEEEECCCCCCCCEEEEEECC NLSEKGCLSLAYNQETLFSGNSAKEKGGAIYTKHMVLRHNGPVSFVNNSAKLGGAIAIQS CCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCEEEEEEC GGSLSIIAGGGSVLFQNNSCHFSDQGTVRNAIYLEKNALLSSLEARHGDILFFDPIVQEV CCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCEEEECHHHHHH VSPEFSTTSALTPLRIQTNTNRAVIFSSENLSKEEKTEANLISKIQQPIELQSGCLVLKD CCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC RVILSAPSLSQAPQALLVMDVGTSLTTSSDLKLTTLSIPLHSIDTENSVSIQSPTLSIQK EEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCEEEE IFLSNSEHENFYENVELLSKDQKDIPLLSLPKGLPHPDLPDGNLSSHFGYQGDWNFSWQT EEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECC SDQRETLVANWTANSYIPHPERQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWG CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH SAVSNLFYSHGNSGKSTDNWKHRSLGYLFGISTHSLDDHSFCLAAGQLFGKSSDSFVTSA HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHEEHHHHHCCCCCCEEECC DTTSYIAAIQTQIATSLIKISAQACYNESIHELKTKYRSFSKEGFGAWHSVAVSGEIGAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC IPIVSNGSGLFSSFSIFSKLQGFSGKQDGFEESRGEARAFADSSFTNISLPVGIAFEKKS CEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHHEECCCCCCEEEEEEEEEECCCC QKTRNYYHFLGAYIQDLKRCVESGPVTLLKNSVTWDAPMANLDSRAWMFRLTNQRALHRF HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHH QTLVNMSYMLRGQSYSYSLDLGTTYRF HHHHHHHHEEECCCEEEEEECCCEECC >Mature Secondary Structure MRPDHVNLCCLCATILSPTAILFGQDALDKSALITKNPNSIVCTFLEDCTMENFSPALLS CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCEEEEEEHHCCCCCCCHHHHH HARQDDPLYIIGNTHNWFVSNLHPSTNEERFLKEKGDLSIQDFRFLSFTDCSSSTEDSPS HCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC ILYHKNGQLFLRNNGNMSFYRNHSEGSGGALSTDALFLQHNYLFTNFEENSSAKNGGAIQ EEEECCCEEEEEECCCEEEEECCCCCCCCCEECCEEEEEECEEEEECCCCCCCCCCCEEE AQTLSLSRNVSSLSFSRNRANLNGGAICCQNLICSGNVNPLFFTNNSALNGGAICCINEQ EEEEEECCCCCHHEECCCCCCCCCCHHEEHHHEECCCCCEEEEECCCCCCCCEEEEEECC NLSEKGCLSLAYNQETLFSGNSAKEKGGAIYTKHMVLRHNGPVSFVNNSAKLGGAIAIQS CCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCEEEEEEC GGSLSIIAGGGSVLFQNNSCHFSDQGTVRNAIYLEKNALLSSLEARHGDILFFDPIVQEV CCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCEEEECHHHHHH VSPEFSTTSALTPLRIQTNTNRAVIFSSENLSKEEKTEANLISKIQQPIELQSGCLVLKD CCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC RVILSAPSLSQAPQALLVMDVGTSLTTSSDLKLTTLSIPLHSIDTENSVSIQSPTLSIQK EEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCEEEE IFLSNSEHENFYENVELLSKDQKDIPLLSLPKGLPHPDLPDGNLSSHFGYQGDWNFSWQT EEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECC SDQRETLVANWTANSYIPHPERQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWG CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH SAVSNLFYSHGNSGKSTDNWKHRSLGYLFGISTHSLDDHSFCLAAGQLFGKSSDSFVTSA HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHEEHHHHHCCCCCCEEECC DTTSYIAAIQTQIATSLIKISAQACYNESIHELKTKYRSFSKEGFGAWHSVAVSGEIGAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC IPIVSNGSGLFSSFSIFSKLQGFSGKQDGFEESRGEARAFADSSFTNISLPVGIAFEKKS CEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCHHEECCCCCCEEEEEEEEEECCCC QKTRNYYHFLGAYIQDLKRCVESGPVTLLKNSVTWDAPMANLDSRAWMFRLTNQRALHRF HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHH QTLVNMSYMLRGQSYSYSLDLGTTYRF HHHHHHHHEEECCCEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935