| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834863
GI number: 15834863
Start: 281689
End: 283452
Strand: Reverse
Name: Not Available
Synonym: TC0243
Alternate gene names: 15834863
Gene position: 283452-281689 (Counterclockwise)
Preceding gene: 15834865
Following gene: 15834862
Centisome position: 26.42
GC content: 40.93
Gene sequence:
>1764_bases ATGAAAAAGTTTATTAGCTATGCACTTATGATCCTCACCTTGATAGGATTTTGGGAATTTTTTGCTCAAAACTACCCGAG TTTTGGCTTTATATGCCCCCCTCCATCTAAAGTGCTTATGACAGGAATCAACTCTTTCCCGGTACTTCTTCAACATTCTT GGTATACAGTTCAAGGTATTTTAGGAGGATTCTTTTTAGCATTACTACTTTCGATCTCTCTCTCTGTTACCATGCTTTTA TTCCCTTCCATTCAGGGAGTATTACATCCCTTATGCGTCCTAGTGCAGTGTCTTCCTATGTTTACTCTGACTCCCTTAAT CGTTCTTTGGTTTGGATGGGGAGCTAGGGCCGTCATCATTCCAACCGCTTTAAGCATTTTTTTCCCTTTAGCATTAACTA TTCATCAGGGAATCAAAAATCCTCCCGAAGAGCTGTTAGAACAATTTACTCTTTGTCAAGCAACCACCTGGCAAACCCTC ATTAAACTAAGAATCCCTCATGGACTCCCCCATATTTTCTCTGGTCTTAAGATCGCTATGAGTGCAGCAGGATTTGCAAC TATTGCCGGAGAATGGGTGGCAGCCCAATCTGGTTTAGGAATCCTAATTTTAGAAAGTCGAAGAAACTATGATATGGCAA TGGCTCTAGCAGGTATATCTGTTCTTACCCTACTCACCTTAAGCCTGTTTTACAGTATTCTCCTTCTTGAACGAAGTGTA TTCTCTTTTTTCAGAACTGAAAAATCGTCTCGTAAATCCCCACAAAAACAATGGCGCTTTGCATTCATTCCTCTTACTTT GCTCATCGGACTATTTTGCCTAAAAGAGAAATCCACTGATACTACTCCCCTTCCTAAAAAGTCCTTTACGCTACTCTTAG ACTGGACTCCTAATCCCAACCACGTACCCCTTTATGTAGGCGTAGAAAAAGGATTTTTTCTAGATGAAGGTATTTCTTTA ACTCTGCAAAAAAATACTGACACCTGCTCCTCTATTCCTCATCTTCTTCTTGAAAAAGTGGATTACACCCTCTACCACAG CTTGGGAATATTAAAAACTGCGGTTAGAGGGGCTCCGATTCAGGTTGTTGGTAGACTAATCGATAGTTCTCTGCAAGGAC TCATTTACCGAAAACATGAGGGAATTAACAAACTGGAAGATCTTAATGGCCGAGTACTCGGCTTTTGCCTCAATGATTCT AAAAATCTACCGCAACTACTCAAATCTTTACGCGAACATCACGTTGTTCCTTCAGCTATCAAAAATGTTAGTGCGGATAT GATTTCTCCCATGCTCTCTCACCAAATAGACTTCTTATATGGCGCTTTTTATAACATTGAAGGGGTAACTATTTCTTTGA AAGGAGCCCCCACCGACTGTTTCCTTTCCGACACTTATGGATCTCCTACCGGTCCACAGCTCCTTTTATGTGGGAAAAGA GGATCTCATGCCACAACTCCTCAGGTAATTCGTAGCATGCAAAAAGCTTTATCGCGTAGTTTAAATTTCTGCCAAGAATA TCCCCAAGATGCTTTCGCGATCTATGTAGAAGCCACCAAAGATTCTCCTAAGATACGGTCCGATGAGCTAGCACAATGGG AAGCTACGCTTCCCTTACTCGCTAAAACACAATCTTCTCTATCACGGGAATTACTACAAACCTTACTCTCAACATTATCT TCTACTTATCCCGATCTGCAAGCATCTATTGATTCTTTCGTTATCGAAACCCTGATTTCTAATGATCCATCAGATCTCTG TTAG
Upstream 100 bases:
>100_bases TTTATCTTCAGGAACCATTACAATCCCTAAACTATCATTCTCTTGCCGCATATGTTCTCTTTCCTTATGCTCCTCCGATA ACGAAGTCTTTTCTCCTCTC
Downstream 100 bases:
>100_bases ATTTCCTCATCTGTCCTTCTGTCACATTTTTTTGATAACAATGAGATTTTTGAATCTTCTCTTATTAATTCAGTTTCACT AAATCTCAGTTTGGACTAAA
Product: ABC transporter, permease protein, putative
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MKKFISYALMILTLIGFWEFFAQNYPSFGFICPPPSKVLMTGINSFPVLLQHSWYTVQGILGGFFLALLLSISLSVTMLL FPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVIIPTALSIFFPLALTIHQGIKNPPEELLEQFTLCQATTWQTL IKLRIPHGLPHIFSGLKIAMSAAGFATIAGEWVAAQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSV FSFFRTEKSSRKSPQKQWRFAFIPLTLLIGLFCLKEKSTDTTPLPKKSFTLLLDWTPNPNHVPLYVGVEKGFFLDEGISL TLQKNTDTCSSIPHLLLEKVDYTLYHSLGILKTAVRGAPIQVVGRLIDSSLQGLIYRKHEGINKLEDLNGRVLGFCLNDS KNLPQLLKSLREHHVVPSAIKNVSADMISPMLSHQIDFLYGAFYNIEGVTISLKGAPTDCFLSDTYGSPTGPQLLLCGKR GSHATTPQVIRSMQKALSRSLNFCQEYPQDAFAIYVEATKDSPKIRSDELAQWEATLPLLAKTQSSLSRELLQTLLSTLS STYPDLQASIDSFVIETLISNDPSDLC
Sequences:
>Translated_587_residues MKKFISYALMILTLIGFWEFFAQNYPSFGFICPPPSKVLMTGINSFPVLLQHSWYTVQGILGGFFLALLLSISLSVTMLL FPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVIIPTALSIFFPLALTIHQGIKNPPEELLEQFTLCQATTWQTL IKLRIPHGLPHIFSGLKIAMSAAGFATIAGEWVAAQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSV FSFFRTEKSSRKSPQKQWRFAFIPLTLLIGLFCLKEKSTDTTPLPKKSFTLLLDWTPNPNHVPLYVGVEKGFFLDEGISL TLQKNTDTCSSIPHLLLEKVDYTLYHSLGILKTAVRGAPIQVVGRLIDSSLQGLIYRKHEGINKLEDLNGRVLGFCLNDS KNLPQLLKSLREHHVVPSAIKNVSADMISPMLSHQIDFLYGAFYNIEGVTISLKGAPTDCFLSDTYGSPTGPQLLLCGKR GSHATTPQVIRSMQKALSRSLNFCQEYPQDAFAIYVEATKDSPKIRSDELAQWEATLPLLAKTQSSLSRELLQTLLSTLS STYPDLQASIDSFVIETLISNDPSDLC >Mature_587_residues MKKFISYALMILTLIGFWEFFAQNYPSFGFICPPPSKVLMTGINSFPVLLQHSWYTVQGILGGFFLALLLSISLSVTMLL FPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVIIPTALSIFFPLALTIHQGIKNPPEELLEQFTLCQATTWQTL IKLRIPHGLPHIFSGLKIAMSAAGFATIAGEWVAAQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSV FSFFRTEKSSRKSPQKQWRFAFIPLTLLIGLFCLKEKSTDTTPLPKKSFTLLLDWTPNPNHVPLYVGVEKGFFLDEGISL TLQKNTDTCSSIPHLLLEKVDYTLYHSLGILKTAVRGAPIQVVGRLIDSSLQGLIYRKHEGINKLEDLNGRVLGFCLNDS KNLPQLLKSLREHHVVPSAIKNVSADMISPMLSHQIDFLYGAFYNIEGVTISLKGAPTDCFLSDTYGSPTGPQLLLCGKR GSHATTPQVIRSMQKALSRSLNFCQEYPQDAFAIYVEATKDSPKIRSDELAQWEATLPLLAKTQSSLSRELLQTLLSTLS STYPDLQASIDSFVIETLISNDPSDLC
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=179, Percent_Identity=30.7262569832402, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321050, Length=107, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323997, Length=107, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319957, Length=107, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322616, Length=107, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 65128; Mature: 65128
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFISYALMILTLIGFWEFFAQNYPSFGFICPPPSKVLMTGINSFPVLLQHSWYTVQGI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCHHHHCCCHHHHHH LGGFFLALLLSISLSVTMLLFPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH PTALSIFFPLALTIHQGIKNPPEELLEQFTLCQATTWQTLIKLRIPHGLPHIFSGLKIAM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SAAGFATIAGEWVAAQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSV HHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSFFRTEKSSRKSPQKQWRFAFIPLTLLIGLFCLKEKSTDTTPLPKKSFTLLLDWTPNPN HHHHHHHHHHCCCHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC HVPLYVGVEKGFFLDEGISLTLQKNTDTCSSIPHLLLEKVDYTLYHSLGILKTAVRGAPI EEEEEEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QVVGRLIDSSLQGLIYRKHEGINKLEDLNGRVLGFCLNDSKNLPQLLKSLREHHVVPSAI HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHH KNVSADMISPMLSHQIDFLYGAFYNIEGVTISLKGAPTDCFLSDTYGSPTGPQLLLCGKR HHCHHHHHHHHHHHHHHHHHHHHEEECEEEEEECCCCCCCEEECCCCCCCCCEEEEECCC GSHATTPQVIRSMQKALSRSLNFCQEYPQDAFAIYVEATKDSPKIRSDELAQWEATLPLL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCHHH AKTQSSLSRELLQTLLSTLSSTYPDLQASIDSFVIETLISNDPSDLC HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKFISYALMILTLIGFWEFFAQNYPSFGFICPPPSKVLMTGINSFPVLLQHSWYTVQGI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCHHHHCCCHHHHHH LGGFFLALLLSISLSVTMLLFPSIQGVLHPLCVLVQCLPMFTLTPLIVLWFGWGARAVII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH PTALSIFFPLALTIHQGIKNPPEELLEQFTLCQATTWQTLIKLRIPHGLPHIFSGLKIAM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SAAGFATIAGEWVAAQSGLGILILESRRNYDMAMALAGISVLTLLTLSLFYSILLLERSV HHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSFFRTEKSSRKSPQKQWRFAFIPLTLLIGLFCLKEKSTDTTPLPKKSFTLLLDWTPNPN HHHHHHHHHHCCCHHHHHEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC HVPLYVGVEKGFFLDEGISLTLQKNTDTCSSIPHLLLEKVDYTLYHSLGILKTAVRGAPI EEEEEEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QVVGRLIDSSLQGLIYRKHEGINKLEDLNGRVLGFCLNDSKNLPQLLKSLREHHVVPSAI HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHH KNVSADMISPMLSHQIDFLYGAFYNIEGVTISLKGAPTDCFLSDTYGSPTGPQLLLCGKR HHCHHHHHHHHHHHHHHHHHHHHEEECEEEEEECCCCCCCEEECCCCCCCCCEEEEECCC GSHATTPQVIRSMQKALSRSLNFCQEYPQDAFAIYVEATKDSPKIRSDELAQWEATLPLL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCHHH AKTQSSLSRELLQTLLSTLSSTYPDLQASIDSFVIETLISNDPSDLC HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]