Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15834862

GI number: 15834862

Start: 280934

End: 281533

Strand: Reverse

Name: Not Available

Synonym: TC0242

Alternate gene names: 15834862

Gene position: 281533-280934 (Counterclockwise)

Preceding gene: 15834863

Following gene: 15834861

Centisome position: 26.24

GC content: 43.33

Gene sequence:

>600_bases
ATGGACTGGTCATTCTTTTTATTGTCTCAGAGCTGTATCTTATTTTTGGCTTCGGATTCTATGACTAATGTCGAGGTCCT
CAATAAAATCCTTAGTAATCTATCCAAAAAAAGCCAAGCTCTACTACTGATCCGCGAAAGTCTTTTTGCTCTTCTAGGGG
TATTTATTTTTTATCCTGGGCTTTCAGGGCTTATTTACTCCCTGCAAACACCTCCGTGCGCAGTCACTTTTGTTGGAGGA
TGCGGAGTTATGTTAGCGGGCATGCGAGCAATCCTTCGGAATACCCATCCAGACCGTTGGGGTAAGTTTTCCTCTCTTTC
TCATGCACCCAAAGTAGCGCCTATAGCGCTCCCTTTGATGATTGGGCCTTCGTGGTTGTGTGCCTGCGCACCTTTAACCA
CGCAACAAATCCCCTTTTCTATTATTTGTGCGTTGCTATTTCTTTCTTGGTTAATGATGTCGATAACTACAATTGTTCTC
CATCTAACCAGCAAGGCAGGCTCTCAGGCAATCATTGCAACACAAACCATTTTAGGACTTGTTGTCGTAATTATAGGCGC
GCAACTCCTTGTATCTGGTTTACAGCAAACTTTCCTATAA

Upstream 100 bases:

>100_bases
CTTCTCTTATTAATTCAGTTTCACTAAATCTCAGTTTGGACTAAAATTTTCCAAGGTCTTTTTTTTTCAGACACAATCAA
CCTTCTTACAAATATATTTT

Downstream 100 bases:

>100_bases
GAAAGCAGAGGTATATTTATGCTACATTCACTGTTTCGCCTTACCTTACTTTTTTATGCTCTTTTTAACTCCCTGGGATC
TTTACCAGTCTTTGTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG
CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL
HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL

Sequences:

>Translated_199_residues
MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG
CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL
HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL
>Mature_199_residues
MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG
CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL
HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21471; Mature: 21471

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPG
CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSGLIYSLQTPPCAVTFVGGCGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLM
HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
IGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVLHLTSKAGSQAIIATQTILGL
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVVIIGAQLLVSGLQQTFL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPG
CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSGLIYSLQTPPCAVTFVGGCGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLM
HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
IGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVLHLTSKAGSQAIIATQTILGL
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VVVIIGAQLLVSGLQQTFL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA