| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358140
GI number: 13358140
Start: 720239
End: 721192
Strand: Reverse
Name: Not Available
Synonym: UU575
Alternate gene names: NA
Gene position: 721192-720239 (Counterclockwise)
Preceding gene: 13358141
Following gene: 13358139
Centisome position: 95.94
GC content: 21.17
Gene sequence:
>954_bases ATGTATACAAAACTAACATGAAATAATTATGAATTTGTTGAGCAAATAAAAGAAGATATTAATCCTGGACAACAAATTTC GACCTTGACATTATTATTATGAACTTATTATGGTTATGATATTTATTTTGAGTATTTAAAAGATAAAAATATTGTTCTAT TTTATGCACAAGCAAATGAAGAATTAAAGATAATTGAACAAAATAAAATTGCAACACAGTTTATTGGCAAATTTTTTATT ATATTCGCTTATTTTGATGCAAAAAAATATGATTGAACAACATTGATTCCAATTGCTTTAGAAGCATTAAAAACAAATTT TAAAAAAGAATTTTTATTAGCAATTAATGGAATACAAGATGAAAATTATTTAAATAATTTATCTCAATTTAATTTTGAAT TAATTTATAGTTGATATTCAAATTTTATTTATGAAACGCAATCATTAAAATACTTTTGTGGAAAAATTCTACAAAAAAAG CGTAATAATCTTAATTTTTTTATTAAAAATTTTAAAAATGATTATGAAATTATTAAGTATAATCCTAAATTTCATTTACA TGAGGTTTGCACTTTCTTAAAAGAATGAGATGTTAAAAATTTTATTAATTCAAAAAGAATGCTAGTTAATTCTAATTCTG ATTTGTTATTAAACACACAAACTAATCCTTATTTTATGGGATCACTTTTAATAAAAAAATCAATAAATAAAATAGTTGGA TTTACATTAGTTTATACTCGTCCAAATATTGCAGAAATTCTTATTGAGCAAACAGATCGTGAAATTAGAGGTATGTATCA ATATTTATTATCACAAAATTTAATAATTAATAATATTAATAATTGATTGATAGATCGACAAGATGGGGCGTGGTCTGATA ATATAAGTGCTTCAAAATTATCATATGCTCCTAAAATAATTACTAAGAGAGTTAATGTTTTAATCAAGGAATAA
Upstream 100 bases:
>100_bases ACGTCGTGCTCCTCAATTTACAAAACGTTAATTTATTTTTAATTATTAAACATTTAAAAATCCATTTTATATGGATTTTT ATTATATCTTATAAGGTTAT
Downstream 100 bases:
>100_bases AAAATATGATAACTGATAAATTAATTAAAGAATTAAATGAAATTACAAGATTATATTATAAAAATGATCGTAATCAATTT AAAAAATCTTTAATAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYTKLTWNNYEFVEQIKEDINPGQQISTLTLLLWTYYGYDIYFEYLKDKNIVLFYAQANEELKIIEQNKIATQFIGKFFI IFAYFDAKKYDWTTLIPIALEALKTNFKKEFLLAINGIQDENYLNNLSQFNFELIYSWYSNFIYETQSLKYFCGKILQKK RNNLNFFIKNFKNDYEIIKYNPKFHLHEVCTFLKEWDVKNFINSKRMLVNSNSDLLLNTQTNPYFMGSLLIKKSINKIVG FTLVYTRPNIAEILIEQTDREIRGMYQYLLSQNLIINNINNWLIDRQDGAWSDNISASKLSYAPKIITKRVNVLIKE
Sequences:
>Translated_317_residues MYTKLT*NNYEFVEQIKEDINPGQQISTLTLLL*TYYGYDIYFEYLKDKNIVLFYAQANEELKIIEQNKIATQFIGKFFI IFAYFDAKKYD*TTLIPIALEALKTNFKKEFLLAINGIQDENYLNNLSQFNFELIYS*YSNFIYETQSLKYFCGKILQKK RNNLNFFIKNFKNDYEIIKYNPKFHLHEVCTFLKE*DVKNFINSKRMLVNSNSDLLLNTQTNPYFMGSLLIKKSINKIVG FTLVYTRPNIAEILIEQTDREIRGMYQYLLSQNLIINNINN*LIDRQDGAWSDNISASKLSYAPKIITKRVNVLIKE >Mature_317_residues MYTKLT*NNYEFVEQIKEDINPGQQISTLTLLL*TYYGYDIYFEYLKDKNIVLFYAQANEELKIIEQNKIATQFIGKFFI IFAYFDAKKYD*TTLIPIALEALKTNFKKEFLLAINGIQDENYLNNLSQFNFELIYS*YSNFIYETQSLKYFCGKILQKK RNNLNFFIKNFKNDYEIIKYNPKFHLHEVCTFLKE*DVKNFINSKRMLVNSNSDLLLNTQTNPYFMGSLLIKKSINKIVG FTLVYTRPNIAEILIEQTDREIRGMYQYLLSQNLIINNINN*LIDRQDGAWSDNISASKLSYAPKIITKRVNVLIKE
Specific function: Unknown
COG id: COG4866
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36633; Mature: 36633
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTKLTNNYEFVEQIKEDINPGQQISTLTLLLTYYGYDIYFEYLKDKNIVLFYAQANEEL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCE KIIEQNKIATQFIGKFFIIFAYFDAKKYDTTLIPIALEALKTNFKKEFLLAINGIQDENY EEEEHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCHHHEEEEEEECCCCHHH LNNLSQFNFELIYSYSNFIYETQSLKYFCGKILQKKRNNLNFFIKNFKNDYEIIKYNPKF HHHHHHCCEEEEEEHHHHEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC HLHEVCTFLKEDVKNFINSKRMLVNSNSDLLLNTQTNPYFMGSLLIKKSINKIVGFTLVY CHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEE TRPNIAEILIEQTDREIRGMYQYLLSQNLIINNINNLIDRQDGAWSDNISASKLSYAPKI ECCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH ITKRVNVLIKE HHHHHHHHCCC >Mature Secondary Structure MYTKLTNNYEFVEQIKEDINPGQQISTLTLLLTYYGYDIYFEYLKDKNIVLFYAQANEEL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCE KIIEQNKIATQFIGKFFIIFAYFDAKKYDTTLIPIALEALKTNFKKEFLLAINGIQDENY EEEEHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCHHHEEEEEEECCCCHHH LNNLSQFNFELIYSYSNFIYETQSLKYFCGKILQKKRNNLNFFIKNFKNDYEIIKYNPKF HHHHHHCCEEEEEEHHHHEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC HLHEVCTFLKEDVKNFINSKRMLVNSNSDLLLNTQTNPYFMGSLLIKKSINKIVGFTLVY CHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCEEEEE TRPNIAEILIEQTDREIRGMYQYLLSQNLIINNINNLIDRQDGAWSDNISASKLSYAPKI ECCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH ITKRVNVLIKE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12949158; 1386735 [H]