Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358139

GI number: 13358139

Start: 719316

End: 720233

Strand: Reverse

Name: Not Available

Synonym: UU574

Alternate gene names: NA

Gene position: 720233-719316 (Counterclockwise)

Preceding gene: 13358140

Following gene: 13358136

Centisome position: 95.81

GC content: 21.46

Gene sequence:

>918_bases
ATGATAACTGATAAATTAATTAAAGAATTAAATGAAATTACAAGATTATATTATAAAAATGATCGTAATCAATTTAAAAA
ATCTTTAATAAATATATGAAGCAAAACAATGGGTTATACTCCGAATTTGCAAGACCCAAAAACTTATAATGAAAAACTAC
TTTATATGTATTTAAATACAGATCAATCGAAAATTTTAGAAATTGTCGATAAAATAAGTTTTAAAAAATGATTAATAAAA
CATCGATTATATCAATATCAAGTTCCAACTTTAGCAATTTTTAATCGTCAAAATCAAATTACTTTATTAGATCTTAATAA
GTTCCCTAAACCTTATATTATTAAATTGAATAATAGCACTGAAAATGAAGATTTATATATTATTCGTGAAACTACTTCAC
AAGCAGAATTAACACAAATAATAACTCATTTTAATAACATCTTGCTTAATAAAAAAATTAATCATCCACGTAATTTTTAT
GAAACATGATGTTATTCACAAATTAAACCACAAGTACTTATTGAACCTTTATTAGGAAAACAAACACTCGTTGCTGATTA
TAAAATATTTTGTTTTGCACAAGAGCAATTTTGTTTATATATGAATAAGGATGAAATTGAAAAAAATAATTGAAATTGGG
ATTTTTTAAAAAGTAATATTTTTGATTTAAAAAATAATAAATCAATTTTAAATCATGAAATAATTAATTTTGACTTTAGT
GAAATAAAAGATGTTTGCCAAAAAATTTATGAAGTTTTAAAAAATGATTTTAAACACTTTCGTATTGATTTTTATTATGT
TGATCATCGCTTGTATATTGGTGAAATTACTTTTAACACATCAAACGCTTTTTTTACTTTTTGAGATGATCCTCAGTGAA
AACAAAAAGACATTGAGTGAGGTAAATATTGAAAATAA

Upstream 100 bases:

>100_bases
AAGATGGGGCGTGGTCTGATAATATAAGTGCTTCAAAATTATCATATGCTCCTAAAATAATTACTAAGAGAGTTAATGTT
TTAATCAAGGAATAAAAAAT

Downstream 100 bases:

>100_bases
AATTAAAAACCAGCAATTTAACCTTGCAGGTTTTTAATTATTTTTTTGTTGATGATCGACCTAATACTTTTGTTACATTT
GAAGCACTACGTACTTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MITDKLIKELNEITRLYYKNDRNQFKKSLINIWSKTMGYTPNLQDPKTYNEKLLYMYLNTDQSKILEIVDKISFKKWLIK
HRLYQYQVPTLAIFNRQNQITLLDLNKFPKPYIIKLNNSTENEDLYIIRETTSQAELTQIITHFNNILLNKKINHPRNFY
ETWCYSQIKPQVLIEPLLGKQTLVADYKIFCFAQEQFCLYMNKDEIEKNNWNWDFLKSNIFDLKNNKSILNHEIINFDFS
EIKDVCQKIYEVLKNDFKHFRIDFYYVDHRLYIGEITFNTSNAFFTFWDDPQWKQKDIEWGKYWK

Sequences:

>Translated_305_residues
MITDKLIKELNEITRLYYKNDRNQFKKSLINI*SKTMGYTPNLQDPKTYNEKLLYMYLNTDQSKILEIVDKISFKK*LIK
HRLYQYQVPTLAIFNRQNQITLLDLNKFPKPYIIKLNNSTENEDLYIIRETTSQAELTQIITHFNNILLNKKINHPRNFY
ET*CYSQIKPQVLIEPLLGKQTLVADYKIFCFAQEQFCLYMNKDEIEKNN*NWDFLKSNIFDLKNNKSILNHEIINFDFS
EIKDVCQKIYEVLKNDFKHFRIDFYYVDHRLYIGEITFNTSNAFFTF*DDPQ*KQKDIE*GKY*K
>Mature_305_residues
MITDKLIKELNEITRLYYKNDRNQFKKSLINI*SKTMGYTPNLQDPKTYNEKLLYMYLNTDQSKILEIVDKISFKK*LIK
HRLYQYQVPTLAIFNRQNQITLLDLNKFPKPYIIKLNNSTENEDLYIIRETTSQAELTQIITHFNNILLNKKINHPRNFY
ET*CYSQIKPQVLIEPLLGKQTLVADYKIFCFAQEQFCLYMNKDEIEKNN*NWDFLKSNIFDLKNNKSILNHEIINFDFS
EIKDVCQKIYEVLKNDFKHFRIDFYYVDHRLYIGEITFNTSNAFFTF*DDPQ*KQKDIE*GKY*K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35642; Mature: 35642

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDKLIKELNEITRLYYKNDRNQFKKSLINISKTMGYTPNLQDPKTYNEKLLYMYLNTD
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
QSKILEIVDKISFKKLIKHRLYQYQVPTLAIFNRQNQITLLDLNKFPKPYIIKLNNSTEN
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCC
EDLYIIRETTSQAELTQIITHFNNILLNKKINHPRNFYETCYSQIKPQVLIEPLLGKQTL
CCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCEEEHHHCCCEEE
VADYKIFCFAQEQFCLYMNKDEIEKNNNWDFLKSNIFDLKNNKSILNHEIINFDFSEIKD
EECEEEEEEEECCEEEEECHHHHCCCCCCCHHHHHHHCCCCCCCHHHHEEECCCHHHHHH
VCQKIYEVLKNDFKHFRIDFYYVDHRLYIGEITFNTSNAFFTFDDPQKQKDIEGKYK
HHHHHHHHHHCCHHEEEEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MITDKLIKELNEITRLYYKNDRNQFKKSLINISKTMGYTPNLQDPKTYNEKLLYMYLNTD
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
QSKILEIVDKISFKKLIKHRLYQYQVPTLAIFNRQNQITLLDLNKFPKPYIIKLNNSTEN
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCEEEEECCCCCC
EDLYIIRETTSQAELTQIITHFNNILLNKKINHPRNFYETCYSQIKPQVLIEPLLGKQTL
CCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCEEEHHHCCCEEE
VADYKIFCFAQEQFCLYMNKDEIEKNNNWDFLKSNIFDLKNNKSILNHEIINFDFSEIKD
EECEEEEEEEECCEEEEECHHHHCCCCCCCHHHHHHHCCCCCCCHHHHEEECCCHHHHHH
VCQKIYEVLKNDFKHFRIDFYYVDHRLYIGEITFNTSNAFFTFDDPQKQKDIEGKYK
HHHHHHHHHHCCHHEEEEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA