| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358127
GI number: 13358127
Start: 703809
End: 704249
Strand: Reverse
Name: Not Available
Synonym: UU563
Alternate gene names: NA
Gene position: 704249-703809 (Counterclockwise)
Preceding gene: 13358128
Following gene: 13358126
Centisome position: 93.69
GC content: 24.72
Gene sequence:
>441_bases ATGAGTATAAAAAAACAATCGTTTCCGAATCGTTTATTAAATTATAAAAGCATTATTGTTTTAATTGCATTATTAATATT GATGGTTATTAGTCACTTAATTGTTGAATTAATTAAAGATTATCACCAATACCGTATGAATGTTTTTATAGCTTATACAT GTATCTTTATGGTAGTTTTCTTATATATTATCTTCTCGCGCCAAGTTTATCGTCGCCGTTGAGCAGTTAAATTAAGAAAA TATAATGAGTATAAACTTAGTTCGTGAGAAATGAAATTAGTTGATCGTTTTTATATCAATGCTAAATATGAATTACGATC TATTGATTATGCCACAATTCGCTTAAATATTTTAATTACAATTATCATTTTACCTAGTTTTATTTATGCATTAGCTTGTA TGATTGCTTATATTATTAAAACCACACAATCAATTACTTAA
Upstream 100 bases:
>100_bases TTAACACTTGAACCTAAAAAACCAGGTAGTATTCATCATTGCCATGCTGATGGTTTTTGTCATTAAAGTTATTAAGAAAA GGAGTAATTATTAAATAATA
Downstream 100 bases:
>100_bases AATAGGAGATTTATATGAATCAGAAAAACAGCTTTGAAGCTAATTCATCGCAAAACAATTATGGTGAATTGCCAATATTA AACCAAAAAAAACGAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSIKKQSFPNRLLNYKSIIVLIALLILMVISHLIVELIKDYHQYRMNVFIAYTCIFMVVFLYIIFSRQVYRRRWAVKLRK YNEYKLSSWEMKLVDRFYINAKYELRSIDYATIRLNILITIIILPSFIYALACMIAYIIKTTQSIT
Sequences:
>Translated_146_residues MSIKKQSFPNRLLNYKSIIVLIALLILMVISHLIVELIKDYHQYRMNVFIAYTCIFMVVFLYIIFSRQVYRRR*AVKLRK YNEYKLSS*EMKLVDRFYINAKYELRSIDYATIRLNILITIIILPSFIYALACMIAYIIKTTQSIT >Mature_145_residues SIKKQSFPNRLLNYKSIIVLIALLILMVISHLIVELIKDYHQYRMNVFIAYTCIFMVVFLYIIFSRQVYRRR*AVKLRKY NEYKLSS*EMKLVDRFYINAKYELRSIDYATIRLNILITIIILPSFIYALACMIAYIIKTTQSIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17189; Mature: 17058
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKKQSFPNRLLNYKSIIVLIALLILMVISHLIVELIKDYHQYRMNVFIAYTCIFMVVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYIIFSRQVYRRRAVKLRKYNEYKLSSEMKLVDRFYINAKYELRSIDYATIRLNILITII HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEHHHHCHHHHHHHHHHHHHH ILPSFIYALACMIAYIIKTTQSIT HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIKKQSFPNRLLNYKSIIVLIALLILMVISHLIVELIKDYHQYRMNVFIAYTCIFMVVF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYIIFSRQVYRRRAVKLRKYNEYKLSSEMKLVDRFYINAKYELRSIDYATIRLNILITII HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEHHHHCHHHHHHHHHHHHHH ILPSFIYALACMIAYIIKTTQSIT HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA