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The map label for this gene is rpsF

Identifier: 13358118

GI number: 13358118

Start: 687207

End: 687689

Strand: Reverse

Name: rpsF

Synonym: UU554

Alternate gene names: 13358118

Gene position: 687689-687207 (Counterclockwise)

Preceding gene: 13358120

Following gene: 13358117

Centisome position: 91.48

GC content: 29.61

Gene sequence:

>483_bases
ATGGCGAAATACGAAATTATGTTAGTTGTTCGTGGTGATTTAGATCAAGAACAAGCTAATAAAGTTGCAAATGAATTAAA
AGCAACTTTAAAGAATACAGAAGTAAAAGAAAATAATTATGATGGCGTGCAACAATTAGCTTATGAGATTAATAAGTTAA
AAACAGCTTATCGTTATGTTTATAATTTTGAAACTACTGATGTTAGCCTAATTAATGAATTTAGACGTTTAGCAATTATT
AATAAAAATGTATTGAGACATATTATTATTAATTTAGAAAAAGATTACGGTTATAAAGCAACTGTTAATACTAAAAAAGT
ACAACGTAATGAAAAACGTGCTGAAGTTTATGCACGTCAAAAAGAAGAAGCAGAACGTCGTGCAGTAGAACGTCAAGCAG
CTTATGAAGCAATGAAAGCCGAACGAGAAGCAGCTGGTTTGCCAGTTAAAGAATTTGTTAAAAACACAAATTCAAAACGT
TAA

Upstream 100 bases:

>100_bases
AATTTTAACGTTTATTCAACAATAATTATTGAACTAAACACTCTTGCTAATTTTAAAACAACAAAATTAGCTATTAATAT
CCATAAGAGGAGTAAAATAA

Downstream 100 bases:

>100_bases
AAATAACGTATTTTAATTTAACTTTAAAGATATTGAGGCGTAAAATGAATAAAGTAATATTGATTGGTAATTTAGTACGT
GATCCAGAAGCTCGTCAAAT

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYDGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAII
NKNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYARQKEEAERRAVERQAAYEAMKAEREAAGLPVKEFVKNTNSKR

Sequences:

>Translated_160_residues
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYDGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAII
NKNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYARQKEEAERRAVERQAAYEAMKAEREAAGLPVKEFVKNTNSKR
>Mature_159_residues
AKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYDGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAIIN
KNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYARQKEEAERRAVERQAAYEAMKAEREAAGLPVKEFVKNTNSKR

Specific function: Binds together with S18 to 16S ribosomal RNA

COG id: COG0360

COG function: function code J; Ribosomal protein S6

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS6_UREP2 (B1AJJ4)

Other databases:

- EMBL:   CP000942
- RefSeq:   YP_001752638.1
- ProteinModelPortal:   B1AJJ4
- SMR:   B1AJJ4
- GeneID:   6155367
- GenomeReviews:   CP000942_GR
- KEGG:   upa:UPA3_0591
- HOGENOM:   HBG734567
- OMA:   GSIEESK
- ProtClustDB:   PRK00453
- BioCyc:   UPAR505682:UPA3_0591-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00360
- InterPro:   IPR000529
- InterPro:   IPR020814
- InterPro:   IPR014717
- Gene3D:   G3DSA:3.30.70.60
- TIGRFAMs:   TIGR00166

Pfam domain/function: PF01250 Ribosomal_S6; SSF54995 Ribosomal_S6

EC number: NA

Molecular weight: Translated: 18723; Mature: 18591

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01048 RIBOSOMAL_S6

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYDGVQQLAYEINKLKTAYRYV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYARQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
KEEAERRAVERQAAYEAMKAEREAAGLPVKEFVKNTNSKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
AKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYDGVQQLAYEINKLKTAYRYV
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYARQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
KEEAERRAVERQAAYEAMKAEREAAGLPVKEFVKNTNSKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA