Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358120

GI number: 13358120

Start: 689213

End: 689701

Strand: Reverse

Name: Not Available

Synonym: UU556

Alternate gene names: NA

Gene position: 689701-689213 (Counterclockwise)

Preceding gene: 13358121

Following gene: 13358118

Centisome position: 91.75

GC content: 22.9

Gene sequence:

>489_bases
ATGGATTTAATTTTTAAAAGATTAAAGTTTATTTCAATTCAAAATTGAGTTTTACTTTTATTTGCAGCTGCGTTATTTGT
TTGTGTAGGAGCTTGAATTGGTCATGAATTAGTGCGTCATAATTTATTTGATGCATATACCCTAAATCATGAAAAAGAAT
TAATTAACATGTTAAATCCTAAAGATTTAGAAGTTTATTTATCACAAAAAGAACAAATTCGTTTATCAATTGGTTTTTTT
GGCCTATTTTTAGTTTTATGAACATTAACATATTTAATTAGCTTAGTTGTTAATATTCGCATTTTAATTAAGTATTTAAA
TGATTTTAATGAAAATAAAACGAAAGTTAAAAAAGCTTTAATTATTTCATTAATTCCTTTCATACACTATGTCTCATCAA
TTTTATTAACAGTTGTGTATGATAAAGTATTTAATTGAAATCGAAAAAAAAGTCACACTTTACAAGAAGAATATATCTCG
GCTTATTAA

Upstream 100 bases:

>100_bases
ACTTTACATATTATTTACAATTTGCTTATGATTATCGAAGACCTCCACGTCCTGGTTTACCAACATCACCACAAGCAGAA
GGGGATAATTAAAAAAGATT

Downstream 100 bases:

>100_bases
AATAATAAAAACAGGGTGAAGTTGCGCTTTTAGCACAAAACCCTGTTTTTCTAAATAAATAAAACATAAATACTATAGTA
TTTTTAACTTTATTTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MDLIFKRLKFISIQNWVLLLFAAALFVCVGAWIGHELVRHNLFDAYTLNHEKELINMLNPKDLEVYLSQKEQIRLSIGFF
GLFLVLWTLTYLISLVVNIRILIKYLNDFNENKTKVKKALIISLIPFIHYVSSILLTVVYDKVFNWNRKKSHTLQEEYIS
AY

Sequences:

>Translated_162_residues
MDLIFKRLKFISIQN*VLLLFAAALFVCVGA*IGHELVRHNLFDAYTLNHEKELINMLNPKDLEVYLSQKEQIRLSIGFF
GLFLVL*TLTYLISLVVNIRILIKYLNDFNENKTKVKKALIISLIPFIHYVSSILLTVVYDKVFN*NRKKSHTLQEEYIS
AY
>Mature_162_residues
MDLIFKRLKFISIQN*VLLLFAAALFVCVGA*IGHELVRHNLFDAYTLNHEKELINMLNPKDLEVYLSQKEQIRLSIGFF
GLFLVL*TLTYLISLVVNIRILIKYLNDFNENKTKVKKALIISLIPFIHYVSSILLTVVYDKVFN*NRKKSHTLQEEYIS
AY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18323; Mature: 18323

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIFKRLKFISIQNVLLLFAAALFVCVGAIGHELVRHNLFDAYTLNHEKELINMLNPKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LEVYLSQKEQIRLSIGFFGLFLVLTLTYLISLVVNIRILIKYLNDFNENKTKVKKALIIS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LIPFIHYVSSILLTVVYDKVFNNRKKSHTLQEEYISAY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLIFKRLKFISIQNVLLLFAAALFVCVGAIGHELVRHNLFDAYTLNHEKELINMLNPKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCH
LEVYLSQKEQIRLSIGFFGLFLVLTLTYLISLVVNIRILIKYLNDFNENKTKVKKALIIS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LIPFIHYVSSILLTVVYDKVFNNRKKSHTLQEEYISAY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA