Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
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Accession | NC_002162 |
Length | 751,719 |
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Identifier: 13358063
GI number: 13358063
Start: 616455
End: 617246
Strand: Reverse
Name: Not Available
Synonym: UU500
Alternate gene names: NA
Gene position: 617246-616455 (Counterclockwise)
Preceding gene: 13358064
Following gene: 13358061
Centisome position: 82.11
GC content: 28.91
Gene sequence:
>792_bases ATGAAAATTTTAGCTATTGGAGATATTTTTTCAAAACAAGGAAGAAAAGCAGTGGCCAATGAATTGCCCAAGCTAAAACA AGAGTATCAAATTGATTTTGTAATTGCTAATGCTGAGAATACAACACATGGTCGCGGTTTGTGTTGAAAACATTATGAAG AATTATTAGGTTATGGAATTGATTGTATTACTATGGGCAATCATACTTGAGATCATCCTGATATTTTTGAAATCCTAACA ACCAAAACAAATATTATTCGTCCATATAATATTATTAATACGCATCAGTATCACTTAGTAGGTTCTGGTTCACGAGTTTT TTATTGTAATAAAAAAATGATTCGTGTAACTAATTTATTAGGTAATTCTATTGATATGAAAGGTTTACAAACAAATCCTT TTGAATCTTTAGATAAAATTATTGCTTTTAATGAAGCACCGATTCATATTGTTGATTTTCATGCTGAAACAACAAGTGAA AAAAATGCACTTTTTTTAGATTTTAAAAGTAAATTGTCTTTAGTTTATGGTACTCATACACATATTCCAACAAATGATGC TAGAATTGTCGATCATACGGCTTTTCAAACTGATTTAGGAATGTGTGGTGCTGCTAATAGCGTGATTGGGGCAAATCCAA GTAGTATTATTCAACGATTTCGTGATCCAAATAAACGTTTTATATTAGAACCAAGTGATGAAAAATATGTTTTTTGTGCT AGTTTAGTTGAAATTGATGATGAAACAAATTTTCCAACTAATATTACACCTATTGTAATTTATGAAAAATAA
Upstream 100 bases:
>100_bases AATTGATGGTGATATCTTAACAATTGCTTTCAGTAAATATCGTCAACCAAAACAAATTAATTTTAATCATAAAACAATCG TAAGAAGAATAGGTTAAAAA
Downstream 100 bases:
>100_bases AAAAAGATTGACTTTTAAGTTTAATTTTGTTATTATCTTATATGTGTTTTTAAATATTTCAAAACACAAAATTAATTTAA AATTTATTAGGTTTAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKILAIGDIFSKQGRKAVANELPKLKQEYQIDFVIANAENTTHGRGLCWKHYEELLGYGIDCITMGNHTWDHPDIFEILT TKTNIIRPYNIINTHQYHLVGSGSRVFYCNKKMIRVTNLLGNSIDMKGLQTNPFESLDKIIAFNEAPIHIVDFHAETTSE KNALFLDFKSKLSLVYGTHTHIPTNDARIVDHTAFQTDLGMCGAANSVIGANPSSIIQRFRDPNKRFILEPSDEKYVFCA SLVEIDDETNFPTNITPIVIYEK
Sequences:
>Translated_263_residues MKILAIGDIFSKQGRKAVANELPKLKQEYQIDFVIANAENTTHGRGLC*KHYEELLGYGIDCITMGNHT*DHPDIFEILT TKTNIIRPYNIINTHQYHLVGSGSRVFYCNKKMIRVTNLLGNSIDMKGLQTNPFESLDKIIAFNEAPIHIVDFHAETTSE KNALFLDFKSKLSLVYGTHTHIPTNDARIVDHTAFQTDLGMCGAANSVIGANPSSIIQRFRDPNKRFILEPSDEKYVFCA SLVEIDDETNFPTNITPIVIYEK >Mature_263_residues MKILAIGDIFSKQGRKAVANELPKLKQEYQIDFVIANAENTTHGRGLC*KHYEELLGYGIDCITMGNHT*DHPDIFEILT TKTNIIRPYNIINTHQYHLVGSGSRVFYCNKKMIRVTNLLGNSIDMKGLQTNPFESLDKIIAFNEAPIHIVDFHAETTSE KNALFLDFKSKLSLVYGTHTHIPTNDARIVDHTAFQTDLGMCGAANSVIGANPSSIIQRFRDPNKRFILEPSDEKYVFCA SLVEIDDETNFPTNITPIVIYEK
Specific function: Unknown
COG id: COG1692
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005235 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29385; Mature: 29385
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILAIGDIFSKQGRKAVANELPKLKQEYQIDFVIANAENTTHGRGLCKHYEELLGYGID CEEEEEEHHHHHCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEE CITMGNHTDHPDIFEILTTKTNIIRPYNIINTHQYHLVGSGSRVFYCNKKMIRVTNLLGN EEEECCCCCCCHHHHHHHCCCCEECCEEEECCEEEEEEECCCEEEEECCCEEEEEHHHCC SIDMKGLQTNPFESLDKIIAFNEAPIHIVDFHAETTSEKNALFLDFKSKLSLVYGTHTHI CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCC PTNDARIVDHTAFQTDLGMCGAANSVIGANPSSIIQRFRDPNKRFILEPSDEKYVFCASL CCCCCEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEE VEIDDETNFPTNITPIVIYEK EEECCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKILAIGDIFSKQGRKAVANELPKLKQEYQIDFVIANAENTTHGRGLCKHYEELLGYGID CEEEEEEHHHHHCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEE CITMGNHTDHPDIFEILTTKTNIIRPYNIINTHQYHLVGSGSRVFYCNKKMIRVTNLLGN EEEECCCCCCCHHHHHHHCCCCEECCEEEECCEEEEEEECCCEEEEECCCEEEEEHHHCC SIDMKGLQTNPFESLDKIIAFNEAPIHIVDFHAETTSEKNALFLDFKSKLSLVYGTHTHI CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCC PTNDARIVDHTAFQTDLGMCGAANSVIGANPSSIIQRFRDPNKRFILEPSDEKYVFCASL CCCCCEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEE VEIDDETNFPTNITPIVIYEK EEECCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]