| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is fhuC
Identifier: 13357998
GI number: 13357998
Start: 496464
End: 497627
Strand: Direct
Name: fhuC
Synonym: UU435
Alternate gene names: 13357998
Gene position: 496464-497627 (Clockwise)
Preceding gene: 13357989
Following gene: 13357999
Centisome position: 66.04
GC content: 26.37
Gene sequence:
>1164_bases ATGAGTTTTTTTAAAAAAAAGAATGATTTACAAAAAGAAGAACACAAACACGTTAGTGTTGTAGATATGAATGAAATTTT AAGCTATGAAGATAGTGAAGAATTTAAAAACGATGAAATTGATTCTAATGAGCCAATTTTTAAACTTAATAATGTTTCAT TAGGTTACGGAAAAAAAATGATTATTAAAAACCTAACGGCAACAATTCATCGCAACGATTTTGTTGTTGTATTAGGGCCT AATGGTTCTGGTAAATCCACATTAATCAAAGGATTGTGTCGTATCAATAATCCTTCAAGTGGTTATATAATGTATAGAGA TAAATTGATATCAAGACCATTATTACCATTTCTTTGATTAGAAAAAGCATGATCTTCTATTGTTAATATATTTACAAAAG ATCGTAAAGAAGTTATTGAAACAATTGATTGACATATTCAAAATTATAAAAAAATTCATGCCTATAAGTCAAAGGAATTA GCTTTAAATTTAGCATATGTCCCACAACTTGCTGTATTCCCAGAAGCTACATCAATTTATGATTTTGTTAAAATGGGTCG TTTTCCAAGTTCAAATGCTTTGGGAATTAATACAAATACAGAACGTGAAAAACAAATTATTGATGAAGCTTTGAAAAATG TTGGTATTTATGAATTCCGCCACAAAAATCTTGAAGATTTATCAGGTGGTCAAAAACAAAAAGCATTAATTGCTTTAGCA CTTGCTCAAGATACTGAAACAATTGTTTTAGATGAACCTACTAACCACTTAGATATAAGAAGTCAATTAGAAATTATTGA ACTTTTACATAAATTACACCACGAAATGAAAAAAACAATTGTTTTAGTTATTCATGATATTAATAATGGTTTAAAATATG CACATAAAGTCATGATTATGAAAAATGGTGAAATGGTTCGTTATGGAAAATTAAAAGAAACAATCGATCATGAAATTTTA TTAGATGTTTTTGGTGTTGAATCAATTATTGTGAAAAATGAATCGACATATCCACAAGTTTCTGTAACAGATTTTAGTTT ACCAAAAGACTATAAAATTAATGAAATCAAAGAAAACGAAAAAACTAATTCAATTTATAATGATGGTGATGAAGTAGAAA TTGAAAATGAATTAGAAAAAGAAGTTGATAAAACAAAAAAATAA
Upstream 100 bases:
>100_bases ATAATTTGCATTTATTTTTTTATGGGAATACAAGATAAACTTCTTGTAGATAAAATGAAATTCTAACTTATAATTTAATT TTTTAGTTTTGGGAGTAAAT
Downstream 100 bases:
>100_bases ATCAAAATTAAAATAAAAACCGCATTGAAGTGGTTTTTATTTTATTATTAATTAATAATTTATAAAAAAGGTAAGCTTAT AAATGAATCAAAGGTTAGAT
Product: ferrichrome transport ATP-binding protein
Products: NA
Alternate protein names: Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSFFKKKNDLQKEEHKHVSVVDMNEILSYEDSEEFKNDEIDSNEPIFKLNNVSLGYGKKMIIKNLTATIHRNDFVVVLGP NGSGKSTLIKGLCRINNPSSGYIMYRDKLISRPLLPFLWLEKAWSSIVNIFTKDRKEVIETIDWHIQNYKKIHAYKSKEL ALNLAYVPQLAVFPEATSIYDFVKMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLEDLSGGQKQKALIALA LAQDTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIHDINNGLKYAHKVMIMKNGEMVRYGKLKETIDHEIL LDVFGVESIIVKNESTYPQVSVTDFSLPKDYKINEIKENEKTNSIYNDGDEVEIENELEKEVDKTKK
Sequences:
>Translated_387_residues MSFFKKKNDLQKEEHKHVSVVDMNEILSYEDSEEFKNDEIDSNEPIFKLNNVSLGYGKKMIIKNLTATIHRNDFVVVLGP NGSGKSTLIKGLCRINNPSSGYIMYRDKLISRPLLPFL*LEKA*SSIVNIFTKDRKEVIETID*HIQNYKKIHAYKSKEL ALNLAYVPQLAVFPEATSIYDFVKMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLEDLSGGQKQKALIALA LAQDTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIHDINNGLKYAHKVMIMKNGEMVRYGKLKETIDHEIL LDVFGVESIIVKNESTYPQVSVTDFSLPKDYKINEIKENEKTNSIYNDGDEVEIENELEKEVDKTKK >Mature_386_residues SFFKKKNDLQKEEHKHVSVVDMNEILSYEDSEEFKNDEIDSNEPIFKLNNVSLGYGKKMIIKNLTATIHRNDFVVVLGPN GSGKSTLIKGLCRINNPSSGYIMYRDKLISRPLLPFL*LEKA*SSIVNIFTKDRKEVIETID*HIQNYKKIHAYKSKELA LNLAYVPQLAVFPEATSIYDFVKMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLEDLSGGQKQKALIALAL AQDTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIHDINNGLKYAHKVMIMKNGEMVRYGKLKETIDHEILL DVFGVESIIVKNESTYPQVSVTDFSLPKDYKINEIKENEKTNSIYNDGDEVEIENELEKEVDKTKK
Specific function: Part of the ABC transporter complex FhuBGCD involved in iron(3+)-hydroxamate import. Responsible for energy coupling to the transport system [H]
COG id: COG1120
COG function: function code PH; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1786803, Length=285, Percent_Identity=30.1754385964912, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1786345, Length=292, Percent_Identity=30.8219178082192, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1790739, Length=279, Percent_Identity=26.8817204301075, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1789032, Length=273, Percent_Identity=26.3736263736264, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788450, Length=263, Percent_Identity=26.615969581749, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI145693107, Length=284, Percent_Identity=25, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788761, Length=253, Percent_Identity=26.4822134387352, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87081791, Length=277, Percent_Identity=25.2707581227437, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787029, Length=262, Percent_Identity=25.1908396946565, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790544, Length=276, Percent_Identity=24.6376811594203, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788506, Length=255, Percent_Identity=27.843137254902, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789891, Length=248, Percent_Identity=24.5967741935484, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786563, Length=245, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1787712, Length=255, Percent_Identity=25.0980392156863, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788002, Length=266, Percent_Identity=22.5563909774436, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789963, Length=122, Percent_Identity=35.2459016393443, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787112, Length=254, Percent_Identity=23.6220472440945, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1789864, Length=261, Percent_Identity=21.455938697318, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786398, Length=273, Percent_Identity=24.1758241758242, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI48994883, Length=107, Percent_Identity=30.8411214953271, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787758, Length=119, Percent_Identity=33.6134453781513, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787548, Length=119, Percent_Identity=32.7731092436975, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17510237, Length=278, Percent_Identity=23.021582733813, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI212646699, Length=370, Percent_Identity=26.2162162162162, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI85724864, Length=285, Percent_Identity=23.5087719298246, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580555, Length=285, Percent_Identity=23.5087719298246, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI85816269, Length=285, Percent_Identity=23.5087719298246, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580553, Length=285, Percent_Identity=23.5087719298246, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.34 [H]
Molecular weight: Translated: 43996; Mature: 43865
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFKKKNDLQKEEHKHVSVVDMNEILSYEDSEEFKNDEIDSNEPIFKLNNVSLGYGKKM CCCCCCCCHHHHHHCCCEEEEEHHHHHCCCCCHHHCCCCCCCCCCEEEEECEECCCCCHH IIKNLTATIHRNDFVVVLGPNGSGKSTLIKGLCRINNPSSGYIMYRDKLISRPLLPFLLE HHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHH KASSIVNIFTKDRKEVIETIDHIQNYKKIHAYKSKELALNLAYVPQLAVFPEATSIYDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEECCCHHHHHHHH KMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLEDLSGGQKQKALIALALAQ HHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCHHHHEEEEEEEC DTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIHDINNGLKYAHKVMIMKNG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHEEEEEEECC EMVRYGKLKETIDHEILLDVFGVESIIVKNESTYPQVSVTDFSLPKDYKINEIKENEKTN CEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCC SIYNDGDEVEIENELEKEVDKTKK CCCCCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure SFFKKKNDLQKEEHKHVSVVDMNEILSYEDSEEFKNDEIDSNEPIFKLNNVSLGYGKKM CCCCCCCHHHHHHCCCEEEEEHHHHHCCCCCHHHCCCCCCCCCCEEEEECEECCCCCHH IIKNLTATIHRNDFVVVLGPNGSGKSTLIKGLCRINNPSSGYIMYRDKLISRPLLPFLLE HHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHH KASSIVNIFTKDRKEVIETIDHIQNYKKIHAYKSKELALNLAYVPQLAVFPEATSIYDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEECCCHHHHHHHH KMGRFPSSNALGINTNTEREKQIIDEALKNVGIYEFRHKNLEDLSGGQKQKALIALALAQ HHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCHHHHEEEEEEEC DTETIVLDEPTNHLDIRSQLEIIELLHKLHHEMKKTIVLVIHDINNGLKYAHKVMIMKNG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHEEEEEEECC EMVRYGKLKETIDHEILLDVFGVESIIVKNESTYPQVSVTDFSLPKDYKINEIKENEKTN CEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCC SIYNDGDEVEIENELEKEVDKTKK CCCCCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]