| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is ureE
Identifier: 13357994
GI number: 13357994
Start: 493080
End: 493529
Strand: Reverse
Name: ureE
Synonym: UU431
Alternate gene names: 13357994
Gene position: 493529-493080 (Counterclockwise)
Preceding gene: 13357995
Following gene: 13357993
Centisome position: 65.65
GC content: 28.89
Gene sequence:
>450_bases TTGACTGTATTTAAAGAAATTTTAGATAATATTGCTAACATTAAAAATGTTGAAAGTTATCAAATTGAGAACATTCATTT AACAAGCGACGACGTTTTAAAACGTGTAATTATCATTTCATCAGATCAAAATGTTGAATATGGAATTCGTTTAGAAGAGG ACAAAAAATTAATGGATGGTGACATCTTATACAAGGATGATTATAAACTAGTTGTTATTAGATTAGAGTTATCAGATGTA TTAATTATTACAGCACACACAATTGGTGAAATGGCAAAAATTGCCCATAATTTAGGTAATCGTCATATGCCGGCTCAATT TACTGAAACACAAATGATCGTTCCCTACGACTATTTAGTAGAAGAATACCTTCAAGATAATAAAGCCCTATATGAAAGAA AAAAAATTAAACTTAAAGAAGCATTTAAACACTGTAGTGACGCTAAATAG
Upstream 100 bases:
>100_bases GAAGCGCCATTAGCACAAAGATATTTCTTATTTTAATTGTCAAACTAAAATATTATATTAATTTATTTTCGTTACATTTT AAAAAAGCGAGGTAATAATC
Downstream 100 bases:
>100_bases TGACTATTTAAATTTATTAGACCTAATGCAGATCACTAACGCAAACTTTCCAATTGGAACATTTAGTCATTCTTTTGGAG TTGAAACTTATATTAGAAAA
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKLVVIRLELSDV LIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLVEEYLQDNKALYERKKIKLKEAFKHCSDAK
Sequences:
>Translated_149_residues MTVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKLVVIRLELSDV LIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLVEEYLQDNKALYERKKIKLKEAFKHCSDAK >Mature_148_residues TVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKLVVIRLELSDVL IITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLVEEYLQDNKALYERKKIKLKEAFKHCSDAK
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_UREP2 (B1AJ72)
Other databases:
- EMBL: CP000942 - RefSeq: YP_001752516.1 - ProteinModelPortal: B1AJ72 - SMR: B1AJ72 - GeneID: 6155650 - GenomeReviews: CP000942_GR - KEGG: upa:UPA3_0450 - HOGENOM: HBG635302 - OMA: KRIQRVT - ProtClustDB: PRK14112 - BioCyc: UPAR505682:UPA3_0450-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 17374; Mature: 17243
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDG CCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHEEEEEECCCCCEEEEEECCCCCCCCC DILYKDDYKLVVIRLELSDVLIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLV CEEEECCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHH EEYLQDNKALYERKKIKLKEAFKHCSDAK HHHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDG CHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHEEEEEECCCCCEEEEEECCCCCCCCC DILYKDDYKLVVIRLELSDVLIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLV CEEEECCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHH EEYLQDNKALYERKKIKLKEAFKHCSDAK HHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA