Click here to switch to the map view.

The map label for this gene is ureF

Identifier: 13357993

GI number: 13357993

Start: 492386

End: 493138

Strand: Reverse

Name: ureF

Synonym: UU430

Alternate gene names: 13357993

Gene position: 493138-492386 (Counterclockwise)

Preceding gene: 13357994

Following gene: 13357992

Centisome position: 65.6

GC content: 28.29

Gene sequence:

>753_bases
ATGAAAGAAAAAAAATTAAACTTAAAGAAGCATTTAAACACTGTAGTGACGCTAAATAGTGACTATTTAAATTTATTAGA
CCTAATGCAGATCACTAACGCAAACTTTCCAATTGGAACATTTAGTCATTCTTTTGGAGTTGAAACTTATATTAGAAAAG
ATATTGTTTTTGATGGAGAATCATTAATTAAAGCGTTACTTCTGTATATGAATGAACAATTGTTACATGGTGATTTATTG
GCAATTTATCAAATTTTTAAACTATTGCCAAAACAAAAAATAAATGCAATTTGAGAAATTGATCAAATGATAAACTTTCA
AGGTTTAGCAAGAGAGACTCGTGAAGGTCAACGTCGAATTGGACAACAAATGGTAAAGATATATAATGAACTTTTTAATT
GTGAACTTTTAGTTGAATATGCTGAAAGAATAAAAAATAAAAAATCTTATGGAAATCCTGCTGTTGCGTTTGCTTTATTA
GCTATGCATTTAAAAATAGATTTAAAAACTGCTTTATATACGCATCTTTACTCTACAGTTGCTGCATTAACGCAAAACTG
TGTACGTGCAATTCCATTAGGACAAGTTAAGGGACAAAAAATAATTTATCAACTTAAACATGTTTATTTTGATGATATTG
TTAATAAAGTCTTTACATTGGATTTTAAAACAGATTTTTGCAAAAATATACCAGGCCTTGAAATTGCACAAATGGAACAC
GAAGACACACCTGTTCGATTATTCATGTCATAA

Upstream 100 bases:

>100_bases
TTAGGTAATCGTCATATGCCGGCTCAATTTACTGAAACACAAATGATCGTTCCCTACGACTATTTAGTAGAAGAATACCT
TCAAGATAATAAAGCCCTAT

Downstream 100 bases:

>100_bases
TTAAAGTTTTAGTCAACATTACATTAATCATAAAAATACCATTTAATATTTTTAAAAATTAAAAAAGAAAGAGAATTAAT
TATGAAAAGACCATTAATTA

Product: urease complex component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKEKKLNLKKHLNTVVTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLL
AIYQIFKLLPKQKINAIWEIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALL
AMHLKIDLKTALYTHLYSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEH
EDTPVRLFMS

Sequences:

>Translated_250_residues
MKEKKLNLKKHLNTVVTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLL
AIYQIFKLLPKQKINAI*EIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALL
AMHLKIDLKTALYTHLYSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEH
EDTPVRLFMS
>Mature_250_residues
MKEKKLNLKKHLNTVVTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLL
AIYQIFKLLPKQKINAI*EIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALL
AMHLKIDLKTALYTHLYSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEH
EDTPVRLFMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 28717; Mature: 28717

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKKLNLKKHLNTVVTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGE
CCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHEECCH
SLIKALLLYMNEQLLHGDLLAIYQIFKLLPKQKINAIEIDQMINFQGLARETREGQRRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHH
QQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTHLYSTVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCEEECCCCC
DTPVRLFMS
CCCEEEEEC
>Mature Secondary Structure
MKEKKLNLKKHLNTVVTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGE
CCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHEECCH
SLIKALLLYMNEQLLHGDLLAIYQIFKLLPKQKINAIEIDQMINFQGLARETREGQRRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHH
QQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTHLYSTVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCEEECCCCC
DTPVRLFMS
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA