| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357964
GI number: 13357964
Start: 463541
End: 464437
Strand: Direct
Name: Not Available
Synonym: UU403
Alternate gene names: NA
Gene position: 463541-464437 (Clockwise)
Preceding gene: 13357959
Following gene: 13357967
Centisome position: 61.66
GC content: 24.75
Gene sequence:
>897_bases ATGAAAAAAGCAATTTTGATTTCCATTTCTTCATTAATTGGGATTAGTGCGATTGTCGCAACTAGTACTTTTTTGTCATT ATCAGCCAAAACAAATATTTATGCAAAATTAATAAAATCAAGCGATCTTAATCAAAGTTTAAATTACACTAATTTATCAG ATGCTAATATTGGAATTAAAGAAATGCTTTTAGGTACTAATAAAATTAATAATGGAAATTATGTTTTATATATTGGAACA CAATCAAACCTTGATAATTTAAATTTTGTTTATGATAATCAAACTAACCATATTAATTCGATTAGTGATTTAAAATATAA TGATAATTTGAAGTTTAATGGATCATTAGCAAAATCAATTAATAATGTCAAAAATTATGCAGATAAAGGTGTTTATGAGC ATGTCCCAGAATTCTATAGTTTTATTGATTTAATGGATACTAATGTTTTTAAACAAAAACAAGATTATGAAAATTTAATT AAACAAAATAAATCAAGCACTATTAAAGAAGATCAAAATTGAGCTAACAATGCACCAACAGATTATTCTTTTGATGTTAA TAAAAAGTATAAAGATAAAAGTGGAAGAGAAGTTTATTTTCGTAACGACACTCAAGCTGTTAAATTTCGTGAAATTTTAA ATTTTTTAAAAAAATATTTATCAAAAGAAAAACTAATTGAATTAAGTACATCACAAACTCCTGGAATTGTTTTGTTTTAT TCTCAAGACAATCTTAGCAAGGGTCCACAAGTTTATGCTAGTTCAAAAATATATGACAAATCAAAAAATGAACGTAAAGA ATCATATGTTTCTGGGGACAACGTCTATAATTCATCACGTTTTGAATTTGGTGGAGATTTAAACGCTGCTATTTATAGTG TCTATGGTAAAAAATAA
Upstream 100 bases:
>100_bases GAAATCACCATCTTTAATTATTATAATATTATATAATTTTTTAATAGTGAATTCTTGATGCGTGAATTTATTTATAATAT TAATTTAAGAGGTATATTAA
Downstream 100 bases:
>100_bases TCAAATATAAAAACTATTGGTCCTTTTTCATACTTAATTACAAGTGTTCATATTTAAAAATATTTTTAATAATTAAAAAT AAATTCAAAAAAAATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI KQNKSSTIKEDQNWANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK
Sequences:
>Translated_298_residues MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI KQNKSSTIKEDQN*ANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK >Mature_298_residues MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI KQNKSSTIKEDQN*ANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33647; Mature: 33647
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIK CCCEEEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH EMLLGTNKINNGNYVLYIGTQSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSI HHHHCCCEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHCCEECCCEEECCHHHHHH NNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLIKQNKSSTIKEDQNANNAPTD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC YSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFYS CEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEEEC QDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK CCCCCCCCCEEECCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCC >Mature Secondary Structure MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIK CCCEEEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH EMLLGTNKINNGNYVLYIGTQSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSI HHHHCCCEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHCCEECCCEEECCHHHHHH NNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLIKQNKSSTIKEDQNANNAPTD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC YSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFYS CEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEEEC QDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK CCCCCCCCCEEECCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA