Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357967

GI number: 13357967

Start: 466522

End: 467718

Strand: Direct

Name: Not Available

Synonym: UU405.1

Alternate gene names: NA

Gene position: 466522-467718 (Clockwise)

Preceding gene: 13357964

Following gene: 13357972

Centisome position: 62.06

GC content: 23.06

Gene sequence:

>1197_bases
TTGATTAATAATAAGAAATTTATTAATAAAACATTTGATAATACTAACCAAATACGATTGCAAAATAATTTAAAAACTTA
TGCTCCTAAATTTTTAAATTTAATTATTATTAATAATATTTTTGTATTAATTATGATTATTAGTTTGTGTATTTTCTTTT
CTGATCCACATTTTTTATATCGAAACGATGTCATTTCGAACCAATATCGCCAATTTATATTTACATATCAGCAAACAGCA
ATCGCAATTGTTTTATATGTTTTAGCATGATATATAATGGTGAATTTTTTCTTCTTTGGCTATTTATTAGAATATGTAAA
ATTAAATAAATTTGAAACATTTAATTTTGCATTAGCGTCAATTTTATTTAATCCTTATGCTTATGTTATTATTGTTAAAA
ATTGAACATCATGATCTTTTTACTGACAACGTAGTTTTTATCATGTATTAAGTGAAAATAATAAAATTGAATTTAATATC
AAAAATTCAAAAACAATTTTCGCTTTAGTTTTTTTAATTATTGCTATTCCTTTTATAATTTTTTCATCGATTGATTATGT
CCCGAAGAATCCAGGGCGTTTGATTATTTTTAACAAAAATAGTTTAGGCGAAAAGGTTATTTACACAAACAATGTCTGAT
TTCATAATATGCATTATTTTACTTCTCAAGGGAATTGAATGTGTATTGGAATTGCATTCTTATATTTTATTAATCCAAAA
GCACGTTGTACAAAAAACAATCGTGTTTTATTAATTGTTTTGTCTTACATTTTAATTATTAGTTCAATTTGATTATGTGT
TTTGTTTCCAATGTTTTCACGGCAATCAACTTGAGTTTGATTTAATAATATGGTGGGTTTTTATAATCATTTAATTACTC
CAATATCTTTTACAATTTTTGCTTATTATTGTATTATCAAAAATAAATATGCAATTCACATAAAGTATTTTTATGCATGA
AAAGGATTTATGTTTTATGTAGTAATTTATGCAATGTATGCGCTATTTTTACCTCTTTTAGCAAATGTTACTGTTTATGG
AGCAATTACGAATATTTGACCAAGCGCAAATGGTAATCCTATTTTTGTAACAATGTTATTCGCACTAATCGGTTATCAAA
TTCTTGTTTTTAGCATAAATTGAACCATATTAAAATTCATTAACAAATACAAAAATAATAAAATCTTAATTGGCTAA

Upstream 100 bases:

>100_bases
AATATTAAAAATAAAAATTATTTTGAGCATAAATTTCAATTATGCAATGTTTTTTGTCTATAATAATATTTAAATATTAA
AGCGATAAGGATGTGATAAC

Downstream 100 bases:

>100_bases
TTTTTTTAAATGCAATTTTATTACCATGCATTTATAGAGCATAAATAAAAAAAGTGAAAGCAATTTATAAAATGCTATTC
ACTTTTTTTATTTTATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MINNKKFINKTFDNTNQIRLQNNLKTYAPKFLNLIIINNIFVLIMIISLCIFFSDPHFLYRNDVISNQYRQFIFTYQQTA
IAIVLYVLAWYIMVNFFFFGYLLEYVKLNKFETFNFALASILFNPYAYVIIVKNWTSWSFYWQRSFYHVLSENNKIEFNI
KNSKTIFALVFLIIAIPFIIFSSIDYVPKNPGRLIIFNKNSLGEKVIYTNNVWFHNMHYFTSQGNWMCIGIAFLYFINPK
ARCTKNNRVLLIVLSYILIISSIWLCVLFPMFSRQSTWVWFNNMVGFYNHLITPISFTIFAYYCIIKNKYAIHIKYFYAW
KGFMFYVVIYAMYALFLPLLANVTVYGAITNIWPSANGNPIFVTMLFALIGYQILVFSINWTILKFINKYKNNKILIG

Sequences:

>Translated_398_residues
MINNKKFINKTFDNTNQIRLQNNLKTYAPKFLNLIIINNIFVLIMIISLCIFFSDPHFLYRNDVISNQYRQFIFTYQQTA
IAIVLYVLA*YIMVNFFFFGYLLEYVKLNKFETFNFALASILFNPYAYVIIVKN*TS*SFY*QRSFYHVLSENNKIEFNI
KNSKTIFALVFLIIAIPFIIFSSIDYVPKNPGRLIIFNKNSLGEKVIYTNNV*FHNMHYFTSQGN*MCIGIAFLYFINPK
ARCTKNNRVLLIVLSYILIISSI*LCVLFPMFSRQST*V*FNNMVGFYNHLITPISFTIFAYYCIIKNKYAIHIKYFYA*
KGFMFYVVIYAMYALFLPLLANVTVYGAITNI*PSANGNPIFVTMLFALIGYQILVFSIN*TILKFINKYKNNKILIG
>Mature_398_residues
MINNKKFINKTFDNTNQIRLQNNLKTYAPKFLNLIIINNIFVLIMIISLCIFFSDPHFLYRNDVISNQYRQFIFTYQQTA
IAIVLYVLA*YIMVNFFFFGYLLEYVKLNKFETFNFALASILFNPYAYVIIVKN*TS*SFY*QRSFYHVLSENNKIEFNI
KNSKTIFALVFLIIAIPFIIFSSIDYVPKNPGRLIIFNKNSLGEKVIYTNNV*FHNMHYFTSQGN*MCIGIAFLYFINPK
ARCTKNNRVLLIVLSYILIISSI*LCVLFPMFSRQST*V*FNNMVGFYNHLITPISFTIFAYYCIIKNKYAIHIKYFYA*
KGFMFYVVIYAMYALFLPLLANVTVYGAITNI*PSANGNPIFVTMLFALIGYQILVFSIN*TILKFINKYKNNKILIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44899; Mature: 44899

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNKKFINKTFDNTNQIRLQNNLKTYAPKFLNLIIINNIFVLIMIISLCIFFSDPHFLY
CCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RNDVISNQYRQFIFTYQQTAIAIVLYVLAYIMVNFFFFGYLLEYVKLNKFETFNFALASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFNPYAYVIIVKNTSSFYQRSFYHVLSENNKIEFNIKNSKTIFALVFLIIAIPFIIFSSI
HHCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
DYVPKNPGRLIIFNKNSLGEKVIYTNNVFHNMHYFTSQGNMCIGIAFLYFINPKARCTKN
CCCCCCCCEEEEECCCCCCCEEEEECCCEECCEEEECCCCEEEEEEEHHHCCCCHHCCCC
NRVLLIVLSYILIISSILCVLFPMFSRQSTVFNNMVGFYNHLITPISFTIFAYYCIIKNK
CCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YAIHIKYFYAKGFMFYVVIYAMYALFLPLLANVTVYGAITNIPSANGNPIFVTMLFALIG
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEHHHHHHHHHH
YQILVFSINTILKFINKYKNNKILIG
HHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MINNKKFINKTFDNTNQIRLQNNLKTYAPKFLNLIIINNIFVLIMIISLCIFFSDPHFLY
CCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RNDVISNQYRQFIFTYQQTAIAIVLYVLAYIMVNFFFFGYLLEYVKLNKFETFNFALASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFNPYAYVIIVKNTSSFYQRSFYHVLSENNKIEFNIKNSKTIFALVFLIIAIPFIIFSSI
HHCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
DYVPKNPGRLIIFNKNSLGEKVIYTNNVFHNMHYFTSQGNMCIGIAFLYFINPKARCTKN
CCCCCCCCEEEEECCCCCCCEEEEECCCEECCEEEECCCCEEEEEEEHHHCCCCHHCCCC
NRVLLIVLSYILIISSILCVLFPMFSRQSTVFNNMVGFYNHLITPISFTIFAYYCIIKNK
CCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YAIHIKYFYAKGFMFYVVIYAMYALFLPLLANVTVYGAITNIPSANGNPIFVTMLFALIG
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEHHHHHHHHHH
YQILVFSINTILKFINKYKNNKILIG
HHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA