| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357953
GI number: 13357953
Start: 453792
End: 455576
Strand: Direct
Name: Not Available
Synonym: UU392
Alternate gene names: NA
Gene position: 453792-455576 (Clockwise)
Preceding gene: 13357952
Following gene: 13357959
Centisome position: 60.37
GC content: 21.12
Gene sequence:
>1785_bases ATGTTAAAAAATTATTTTCAATCAAGTTGATTATATACAACCTTTTTATCACGTTTGGTACTTTTTAAAAAAAGCACATA TTTTTTAGTAGGAATTAGCTTATTTGTTAATTTAATTTTTATAATTATAAATGGTTTAAATATTGCTAATAATATAAAAA CGTATTTGATTTTATTTTATCTTTTTACTAGTATTAATTCACTTTTAACAATAGTCTTTAGCACTATTAAAGCTATTAAT TTATTCAAAGATTTAAAGGATGAAGGAATTGAAATTTTAGTCTTTTCAAAAAGTATTTCACGTAAAAACATTATTTTTAC TAAAATAGGTTTTTTAATATTAAATATTGTTTTTTGAAGTTTAATAACTTATATTTTAAATATTATTTTTTACGTAGTAA ATATAAAGAATAATAACGGTATTAATTTTTTTTATTTATATGCTTTTTTTAATTATTATTTCTGTGGATTAATTTTTGCT AGTATTGCTGCTTTAATTGTTAGTCGTTGATCAAATAAAGTTGCTATGATTATTCCAATTAGTTGTTTTCTCCCCTTTTT AATTGCTGGTGGTGTTGCTAATTTGTATTCAACATCTAAAATTAATCAAGTAGCCAAATACATGAATATTAATTATGATA AATATGATAGTAATACAATTTTAGATGTAGAAAAATTTTATTTAAATAATCATAATGATGAAGTTTATTTAATCACTAAA AATTTAAATAATCCACAATTTAGTAAACGTCAGAATTATTTTTTGAAAGCAGCGTTTGATCACGCAAAAAATGCATCGAC ATTTTTTCATGTCTTATCTTGATTATCTGTTCCTTATCAATTAAATAATAGTTTTTATAAGAATGATATTGATCCTTTTA GTGTTAATAGCCAACACGAAAATTATTTAGATAAATATTTTAATTATCATGGTTTAGAATCAAAATTATATGATTATAAA CTTAACAAACACCCTCATTTACCACAATTTAATATTAATGAAAATCAAAAAGAATATTTTGTTCCTGGAGCTTTAAAAAA TACGAGTCAATTCCCAACACTTGAGAATCGTAATTTAATTTATGCGAGAGAAAATGTAGATCGTTTTGACGTTAATTTCA TTGAGGATGATAATTTATTTTCATCAACTAATGATTTTGTTGGTGAATTAAAATGAGCGGTTATTAGAAATACATTAGAA TCAAAAGTTTTCAATAACTTTGCCAAAAAATTTTATGATAATTTTGATGAAGATATTGATAAACCACAAATTATTGCTGC TTATAATGATGTAATTAATGAACAATCATCAATAAATTTTTCAACAATCGTTGATGAAAATAGTATTCTATTTGCTAAAA AGATAAATAATTATTATGTTAAAAATCTTGTTGAAAAGAAAATTTATTTCATTGTAGCTTTAATGTATTATTTATATTTT AATGAGGAACGTTGAAATCTTTTAGAAAAATTATTAAAAAACGATAAAGTTATTAATTTTTATCGTCCATCATCAATAAG AATCAATGTAAATAATTATGCATATGATATTGGAGGGATTGGAAGTTATGAATTAATGAAAAAAGTAGTTAATAACAAAA CTTTATATCGTTACCAACTACAAAAAAGTAATAATTATGTTTTTCAAACAGCAAAAGAAGTTTATTCTATTAAACGTGCT GATCAAATTGTTAATAAAAATTATTATTGATTAATTTGAATTTTATTTAGTACGATTTTAATTATAAGCTTGGCTTTAAT TTATTTAAAACGAGATTATAAATAA
Upstream 100 bases:
>100_bases AAAACCTTTTTTTAGTAATATAAAGTAAAAAAGATTATTTTTATTAATTAGTATTATTCTTATAATTATTATTAAATTTT TAGAAAGATAGACATTAGCA
Downstream 100 bases:
>100_bases TTATAATTACTTACTAAAACTTAGTTTATTTAGTTCATATTATTAATTAAACCTACTACAGAAGCAACTATATAAGTTTC TGTGTATGAAATTGAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MLKNYFQSSWLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFWSLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA SIAALIVSRWSNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLSWLSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELKWAVIRNTLE SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF NEERWNLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA DQIVNKNYYWLIWILFSTILIISLALIYLKRDYK
Sequences:
>Translated_594_residues MLKNYFQSS*LYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVF*SLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA SIAALIVSR*SNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLS*LSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELK*AVIRNTLE SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF NEER*NLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA DQIVNKNYY*LI*ILFSTILIISLALIYLKRDYK >Mature_594_residues MLKNYFQSS*LYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVF*SLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA SIAALIVSR*SNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLS*LSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELK*AVIRNTLE SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF NEER*NLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA DQIVNKNYY*LI*ILFSTILIISLALIYLKRDYK
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68612; Mature: 68612
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNYFQSSLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYL CCHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FTSINSLLTIVFSTIKAINLFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFSLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH TYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFASIAALIVSRSNKVAMIIPISCF HHHHHHHEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH LPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITKNLN HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCC NPQFSKRQNYFLKAAFDHAKNASTFFHVLSLSVPYQLNNSFYKNDIDPFSVNSQHENYLD CCCCHHHHCHHEEEHHHHCCCHHHHHHHHHEECCEEECCCCCCCCCCCCCCCCCHHHHHH KYFNYHGLESKLYDYKLNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARE HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC NVDRFDVNFIEDDNLFSSTNDFVGELKAVIRNTLESKVFNNFAKKFYDNFDEDIDKPQII CCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE AAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYFNEERN EHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNY HHHHHHCCCCEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCH VFQTAKEVYSIKRADQIVNKNYYLIILFSTILIISLALIYLKRDYK HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKNYFQSSLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYL CCHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FTSINSLLTIVFSTIKAINLFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFSLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH TYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFASIAALIVSRSNKVAMIIPISCF HHHHHHHEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH LPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITKNLN HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCC NPQFSKRQNYFLKAAFDHAKNASTFFHVLSLSVPYQLNNSFYKNDIDPFSVNSQHENYLD CCCCHHHHCHHEEEHHHHCCCHHHHHHHHHEECCEEECCCCCCCCCCCCCCCCCHHHHHH KYFNYHGLESKLYDYKLNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARE HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC NVDRFDVNFIEDDNLFSSTNDFVGELKAVIRNTLESKVFNNFAKKFYDNFDEDIDKPQII CCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE AAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYFNEERN EHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNY HHHHHHCCCCEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCH VFQTAKEVYSIKRADQIVNKNYYLIILFSTILIISLALIYLKRDYK HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA