| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357951
GI number: 13357951
Start: 450602
End: 451417
Strand: Direct
Name: Not Available
Synonym: UU390
Alternate gene names: NA
Gene position: 450602-451417 (Clockwise)
Preceding gene: 13357950
Following gene: 13357952
Centisome position: 59.94
GC content: 24.63
Gene sequence:
>816_bases TTGAATTTAAAGTCATTTGAATTTTTAAAAGGTGATGCAATTGTTGATAACCAAATAAAAAAAGCTATTAATACTAGTTT GATTAAAGCATCATTTTCATGTGCAATTATGTGTATATTAGTTCTTATTTTTGGTTTTTTAATGCGAAAATATTTATTTT ATTTTTCAGATGCATCTAGTTTAATTATTAGCTCTCGTTTGATTTTTCAAATAATTACAATCATTGTTGCTACTTTATCA ATTGTCTATTTTATTGTTCATTTAATCATTTACTTTAGACAAAGAAATAATTTTTTAGCTCCTAAATTTGCATGATCAAT CATATTGTATCTATTGGATGGTATTACAATGTGTTTTATGATTAGTTATGTAGCGGCGATTGTAGGATTAGATTTGACGT TAATAGCCATTGGAATTAGTTTATCAATCATTGTCGCAATGGGAATACTAGGTTTTATTATGAATCATAAAATTGCTTTT AAATTAGGCATTGCTAATATCGTTTTATTTACTATTGCTACAATTGGTTCAATTATTTTATTGATTGTATTTTTTACAAC GAGATATAACCATACTGGTTTTAACAAAGGTGTTATTATTGCTGACATTGTATTAAGTATTATTTGATTGCTCGCTTTAA GTATTGGTTTTGCTTCGACGATTTACATTATTAAAGTAATGGCCGAACATCATAATTTAGATAATAAAAAAATAATGCGT GATTTTACAACTTGAAATAGTTATTTACTATTTGCTTCATTCAATCGTATTTTATTATATGTAATTCGTTTGTTTTTATT GTTTAAAAGAGTATAA
Upstream 100 bases:
>100_bases TAATCAAGTTAAAAATAATATTATTAAATTAATTGATTAATATATATTATTAAATTGTTAAAATTTATGAAATATTTATT ATCTTTTCTGGAGGTTTAAT
Downstream 100 bases:
>100_bases ATATAACAGGTTTGTTTAAACCTGTTTTTTTATGACAATACATTTATTTTTTAGCACTCATTATTTTAAAGTGCTAAAAT TATAATAGTAAAGTAGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNLKSFEFLKGDAIVDNQIKKAINTSLIKASFSCAIMCILVLIFGFLMRKYLFYFSDASSLIISSRLIFQIITIIVATLS IVYFIVHLIIYFRQRNNFLAPKFAWSIILYLLDGITMCFMISYVAAIVGLDLTLIAIGISLSIIVAMGILGFIMNHKIAF KLGIANIVLFTIATIGSIILLIVFFTTRYNHTGFNKGVIIADIVLSIIWLLALSIGFASTIYIIKVMAEHHNLDNKKIMR DFTTWNSYLLFASFNRILLYVIRLFLLFKRV
Sequences:
>Translated_271_residues MNLKSFEFLKGDAIVDNQIKKAINTSLIKASFSCAIMCILVLIFGFLMRKYLFYFSDASSLIISSRLIFQIITIIVATLS IVYFIVHLIIYFRQRNNFLAPKFA*SIILYLLDGITMCFMISYVAAIVGLDLTLIAIGISLSIIVAMGILGFIMNHKIAF KLGIANIVLFTIATIGSIILLIVFFTTRYNHTGFNKGVIIADIVLSII*LLALSIGFASTIYIIKVMAEHHNLDNKKIMR DFTT*NSYLLFASFNRILLYVIRLFLLFKRV >Mature_271_residues MNLKSFEFLKGDAIVDNQIKKAINTSLIKASFSCAIMCILVLIFGFLMRKYLFYFSDASSLIISSRLIFQIITIIVATLS IVYFIVHLIIYFRQRNNFLAPKFA*SIILYLLDGITMCFMISYVAAIVGLDLTLIAIGISLSIIVAMGILGFIMNHKIAF KLGIANIVLFTIATIGSIILLIVFFTTRYNHTGFNKGVIIADIVLSII*LLALSIGFASTIYIIKVMAEHHNLDNKKIMR DFTT*NSYLLFASFNRILLYVIRLFLLFKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30176; Mature: 30176
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKSFEFLKGDAIVDNQIKKAINTSLIKASFSCAIMCILVLIFGFLMRKYLFYFSDASS CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIISSRLIFQIITIIVATLSIVYFIVHLIIYFRQRNNFLAPKFASIILYLLDGITMCFMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SYVAAIVGLDLTLIAIGISLSIIVAMGILGFIMNHKIAFKLGIANIVLFTIATIGSIILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IVFFTTRYNHTGFNKGVIIADIVLSIILLALSIGFASTIYIIKVMAEHHNLDNKKIMRDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TTNSYLLFASFNRILLYVIRLFLLFKRV CCCCEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLKSFEFLKGDAIVDNQIKKAINTSLIKASFSCAIMCILVLIFGFLMRKYLFYFSDASS CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIISSRLIFQIITIIVATLSIVYFIVHLIIYFRQRNNFLAPKFASIILYLLDGITMCFMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SYVAAIVGLDLTLIAIGISLSIIVAMGILGFIMNHKIAFKLGIANIVLFTIATIGSIILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IVFFTTRYNHTGFNKGVIIADIVLSIILLALSIGFASTIYIIKVMAEHHNLDNKKIMRDF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TTNSYLLFASFNRILLYVIRLFLLFKRV CCCCEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA