Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
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Accession | NC_001988 |
Length | 192,000 |
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Identifier: 15004854
GI number: 15004854
Start: 162636
End: 164894
Strand: Direct
Name: Not Available
Synonym: CA_P0151
Alternate gene names: NA
Gene position: 162636-164894 (Clockwise)
Preceding gene: 15004853
Following gene: 15004855
Centisome position: 84.71
GC content: 32.8
Gene sequence:
>2259_bases ATGTTGTTTTTGGGATTACTATTTGCTTATATGTCTAAATGTAACATTTATGCTGATACTAAAAGTATAACTCTAAATCC AAGTGTCGCTACAACTCTGGGCAAAACTGATAATACTTGGACTTTTCAAGTTGGAGATTACAATAATGATGGTGTACCTG ATTTATACGGTATAAGTAAACAAGGAACAAATTCTACCGAAGTACACGTTTTAGATGGTAAATCCAATTATCGAAAATTT TTACTTCAAACTGCTATACCAATAGAAAAGACTGGTGATAATTACGACTTTAAATTAGGCGATTATAATAATGATGGAGT GCCTGATTTATATTGTATCAAAAAAAATGGTTCAAACGGAAAAACCGAAGTACACATTTTAAATGGTAAAGATAATTTTC ATTCCTTTCTTGCTGAGGTAGCAACGGCTTTGCCAGCAACTGATAACAATTGGAGTTTTAGTATTGGAGATTACAATCAT GATGGAACACCTGATTTATACTGTATTAAGAAAAATGGTGCCAATGGAAAAACTGAATTGCATATTTTAAACGGTAAAAA TAACTTCCAATCCTTTCTCTATGAGGTAGGTACAACTTTACCTCAGACAGACAACAATTGGGATTTTGGTGTTAGTGATT ATAATGCCGATGGAGCACTTGATTTATATTGTATAAAAAAGAACGGATCTGGAGCGACAGAAGTGCATATTTTAGATGGT AAAAGTAATTTTAAATCTTTTGCTTTTGAAATAGGAACACCTATGACCCCAACTGATGAAAATACACAATTTATATTGGG ACAAGGTTCTATGAATATATATGCTATTAAAAAGCAAGGTGCAACAGCTACTGAAGTTCAGCAGCTTGGATATAAAGATA CACCAAATACTTCTAATGACTCTAATTCTAATACTTCTACAAAAGTAAATACTGCTCCAATAAACACTAATGGTATCAAC TGGAAATCACATTTTTCTACTGCATTAGGTAAAACTGATGATACTTGGACATTTCAGATGGGCGATTACAATCGTGATGG CGTGCTTGATCTATACGGAATTAGGAAACAAGGTACAACATCTACTGAGGTACACGTCTTAGATGGTAAATCCAATTATC GAAAGTTTTTGCTTCAAACTGTTATACCAATAGAAAAGACTGGTGATAATTACGACTTTAAATTAAGCGATTATAATAAT GATGGTATACCTGATTTATACTGTATTAAGAAAAATGGTGCAAACGGAAGAACTGAAGTGCACGTTTTAAATGGTAAGGA TAATTTTCATTCCTTCTTTTCCGAGGTATCAACAGCTCTACCAAGTACCGATAATAATTGGGACTTTTGCATTGGAAACT ACAATAATGATGAGAAGCCTGATTTATACTGCATTAAAAAGAATGGCGCCAATGGAAAAACTGAGGTACATATTTTAAAT GGTAAGACTAATTTTCAGTCATTTCTCTTGGAGATAGGAACTTCTCTGTCAAACACAGATGACAATTGGAACTTTGGATT AAATGACTACAATAATGATGGACTTATTGATTTATATTGTATTAAAAGAAATGGCAGCGGAGCAACAGAAATCCATATTT TAAATGGTAAGAATAATTTTTCTTCCTTTAATTTTGAGTCAGCAACACCTATGGAGCCAACTGATAAGAATACACAATTT ATAGTTTCTAATGATGGAGCCTTAAATGTATATCCAATAAAAAAGCAAGGTGCAACATCTACTGAGGTTCATGAATTCGG AACTAAAAGCCAAGATCATGATAAAAATTATAATAATAGTAGTAACTTAATAACCTTTATAGGTCAATATGAATCTTTTT CTCCTGTGCCATATAGAGGAGCAGACTATCAAAATAGAACTATTGGATATGGTCACGTAATTCAACCAGGAGAAAACCTA TCATATCTTACAGATGAACAAGCAAGAGATTTACTACAAAGGGATATTCAAAATACTACTAATGCAGTTTCGTCAATAAC TTCAGGGTTAAAATTAACACAAAATCAGTTTGATTCTTTAGTAGACTTCGCTTATAACTGCGGAATTAGTGCACTAGAAT CTTCTATTCTCCTAAAGAATATAAAGGCAGGAAATACTTCAGCAGATACTCTTAAAACAAACTTTATTTCTTGGTCTTAC TGCAATGGAGAAGAGCTTTTAGGGCTTTGGAGGCGTAGAATGGACGAATGGCAAATGTATGAATATAGTGATTATAATAG GGACTATCCTAACTGGTAA
Upstream 100 bases:
>100_bases GATATTTTATAATAATACATCCAACTAAACAGCATAATTACCTTAAATATCAAATAGTTAAGGGGGTGTTAATATACAGA AGAGCAAAAACATCATATTT
Downstream 100 bases:
>100_bases TTTTATTTGTAATTAAGGGAGATATACAATGAAGAAGAAATTATTTTTGGTATCAATTGTACTGATATTAGGCATAGCTT CTACTACTATGTACTTAAAA
Product: integrin-like repeat-containing lysozyme
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Lysozyme; Phage-Related Lysozyme; FG-GAP Repeat-Containing Protein; FG-GAP Repeat Domain Protein; Integrin-Like Protein; Integrin-Like Repeat-Containing Lysozyme; FG-GAP Repeat Domain-Containing Protein; Collagenolytic Protease
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MLFLGLLFAYMSKCNIYADTKSITLNPSVATTLGKTDNTWTFQVGDYNNDGVPDLYGISKQGTNSTEVHVLDGKSNYRKF LLQTAIPIEKTGDNYDFKLGDYNNDGVPDLYCIKKNGSNGKTEVHILNGKDNFHSFLAEVATALPATDNNWSFSIGDYNH DGTPDLYCIKKNGANGKTELHILNGKNNFQSFLYEVGTTLPQTDNNWDFGVSDYNADGALDLYCIKKNGSGATEVHILDG KSNFKSFAFEIGTPMTPTDENTQFILGQGSMNIYAIKKQGATATEVQQLGYKDTPNTSNDSNSNTSTKVNTAPINTNGIN WKSHFSTALGKTDDTWTFQMGDYNRDGVLDLYGIRKQGTTSTEVHVLDGKSNYRKFLLQTVIPIEKTGDNYDFKLSDYNN DGIPDLYCIKKNGANGRTEVHVLNGKDNFHSFFSEVSTALPSTDNNWDFCIGNYNNDEKPDLYCIKKNGANGKTEVHILN GKTNFQSFLLEIGTSLSNTDDNWNFGLNDYNNDGLIDLYCIKRNGSGATEIHILNGKNNFSSFNFESATPMEPTDKNTQF IVSNDGALNVYPIKKQGATSTEVHEFGTKSQDHDKNYNNSSNLITFIGQYESFSPVPYRGADYQNRTIGYGHVIQPGENL SYLTDEQARDLLQRDIQNTTNAVSSITSGLKLTQNQFDSLVDFAYNCGISALESSILLKNIKAGNTSADTLKTNFISWSY CNGEELLGLWRRRMDEWQMYEYSDYNRDYPNW
Sequences:
>Translated_752_residues MLFLGLLFAYMSKCNIYADTKSITLNPSVATTLGKTDNTWTFQVGDYNNDGVPDLYGISKQGTNSTEVHVLDGKSNYRKF LLQTAIPIEKTGDNYDFKLGDYNNDGVPDLYCIKKNGSNGKTEVHILNGKDNFHSFLAEVATALPATDNNWSFSIGDYNH DGTPDLYCIKKNGANGKTELHILNGKNNFQSFLYEVGTTLPQTDNNWDFGVSDYNADGALDLYCIKKNGSGATEVHILDG KSNFKSFAFEIGTPMTPTDENTQFILGQGSMNIYAIKKQGATATEVQQLGYKDTPNTSNDSNSNTSTKVNTAPINTNGIN WKSHFSTALGKTDDTWTFQMGDYNRDGVLDLYGIRKQGTTSTEVHVLDGKSNYRKFLLQTVIPIEKTGDNYDFKLSDYNN DGIPDLYCIKKNGANGRTEVHVLNGKDNFHSFFSEVSTALPSTDNNWDFCIGNYNNDEKPDLYCIKKNGANGKTEVHILN GKTNFQSFLLEIGTSLSNTDDNWNFGLNDYNNDGLIDLYCIKRNGSGATEIHILNGKNNFSSFNFESATPMEPTDKNTQF IVSNDGALNVYPIKKQGATSTEVHEFGTKSQDHDKNYNNSSNLITFIGQYESFSPVPYRGADYQNRTIGYGHVIQPGENL SYLTDEQARDLLQRDIQNTTNAVSSITSGLKLTQNQFDSLVDFAYNCGISALESSILLKNIKAGNTSADTLKTNFISWSY CNGEELLGLWRRRMDEWQMYEYSDYNRDYPNW >Mature_752_residues MLFLGLLFAYMSKCNIYADTKSITLNPSVATTLGKTDNTWTFQVGDYNNDGVPDLYGISKQGTNSTEVHVLDGKSNYRKF LLQTAIPIEKTGDNYDFKLGDYNNDGVPDLYCIKKNGSNGKTEVHILNGKDNFHSFLAEVATALPATDNNWSFSIGDYNH DGTPDLYCIKKNGANGKTELHILNGKNNFQSFLYEVGTTLPQTDNNWDFGVSDYNADGALDLYCIKKNGSGATEVHILDG KSNFKSFAFEIGTPMTPTDENTQFILGQGSMNIYAIKKQGATATEVQQLGYKDTPNTSNDSNSNTSTKVNTAPINTNGIN WKSHFSTALGKTDDTWTFQMGDYNRDGVLDLYGIRKQGTTSTEVHVLDGKSNYRKFLLQTVIPIEKTGDNYDFKLSDYNN DGIPDLYCIKKNGANGRTEVHVLNGKDNFHSFFSEVSTALPSTDNNWDFCIGNYNNDEKPDLYCIKKNGANGKTEVHILN GKTNFQSFLLEIGTSLSNTDDNWNFGLNDYNNDGLIDLYCIKRNGSGATEIHILNGKNNFSSFNFESATPMEPTDKNTQF IVSNDGALNVYPIKKQGATSTEVHEFGTKSQDHDKNYNNSSNLITFIGQYESFSPVPYRGADYQNRTIGYGHVIQPGENL SYLTDEQARDLLQRDIQNTTNAVSSITSGLKLTQNQFDSLVDFAYNCGISALESSILLKNIKAGNTSADTLKTNFISWSY CNGEELLGLWRRRMDEWQMYEYSDYNRDYPNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83963; Mature: 83963
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLGLLFAYMSKCNIYADTKSITLNPSVATTLGKTDNTWTFQVGDYNNDGVPDLYGISK CHHHHHHHHHHHCCEEEECCCEEEECCCHHEECCCCCCEEEEEECCCCCCCCCCCCCCCC QGTNSTEVHVLDGKSNYRKFLLQTAIPIEKTGDNYDFKLGDYNNDGVPDLYCIKKNGSNG CCCCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCEEEEEEECCCCC KTEVHILNGKDNFHSFLAEVATALPATDNNWSFSIGDYNHDGTPDLYCIKKNGANGKTEL CEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEE HILNGKNNFQSFLYEVGTTLPQTDNNWDFGVSDYNADGALDLYCIKKNGSGATEVHILDG EEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECC KSNFKSFAFEIGTPMTPTDENTQFILGQGSMNIYAIKKQGATATEVQQLGYKDTPNTSND CCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCC SNSNTSTKVNTAPINTNGINWKSHFSTALGKTDDTWTFQMGDYNRDGVLDLYGIRKQGTT CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCC STEVHVLDGKSNYRKFLLQTVIPIEKTGDNYDFKLSDYNNDGIPDLYCIKKNGANGRTEV CCEEEEEECCCHHHHHHHHHHCCCEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEE HVLNGKDNFHSFFSEVSTALPSTDNNWDFCIGNYNNDEKPDLYCIKKNGANGKTEVHILN EEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCEEEEEEC GKTNFQSFLLEIGTSLSNTDDNWNFGLNDYNNDGLIDLYCIKRNGSGATEIHILNGKNNF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC SSFNFESATPMEPTDKNTQFIVSNDGALNVYPIKKQGATSTEVHEFGTKSQDHDKNYNNS CCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCC SNLITFIGQYESFSPVPYRGADYQNRTIGYGHVIQPGENLSYLTDEQARDLLQRDIQNTT CCEEEEEECCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH NAVSSITSGLKLTQNQFDSLVDFAYNCGISALESSILLKNIKAGNTSADTLKTNFISWSY HHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEECEEEEEE CNGEELLGLWRRRMDEWQMYEYSDYNRDYPNW CCHHHHHHHHHHHHHHCEEEEECCCCCCCCCC >Mature Secondary Structure MLFLGLLFAYMSKCNIYADTKSITLNPSVATTLGKTDNTWTFQVGDYNNDGVPDLYGISK CHHHHHHHHHHHCCEEEECCCEEEECCCHHEECCCCCCEEEEEECCCCCCCCCCCCCCCC QGTNSTEVHVLDGKSNYRKFLLQTAIPIEKTGDNYDFKLGDYNNDGVPDLYCIKKNGSNG CCCCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCEEEEEEECCCCC KTEVHILNGKDNFHSFLAEVATALPATDNNWSFSIGDYNHDGTPDLYCIKKNGANGKTEL CEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEE HILNGKNNFQSFLYEVGTTLPQTDNNWDFGVSDYNADGALDLYCIKKNGSGATEVHILDG EEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECC KSNFKSFAFEIGTPMTPTDENTQFILGQGSMNIYAIKKQGATATEVQQLGYKDTPNTSND CCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCC SNSNTSTKVNTAPINTNGINWKSHFSTALGKTDDTWTFQMGDYNRDGVLDLYGIRKQGTT CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCC STEVHVLDGKSNYRKFLLQTVIPIEKTGDNYDFKLSDYNNDGIPDLYCIKKNGANGRTEV CCEEEEEECCCHHHHHHHHHHCCCEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEE HVLNGKDNFHSFFSEVSTALPSTDNNWDFCIGNYNNDEKPDLYCIKKNGANGKTEVHILN EEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCEEEEEEC GKTNFQSFLLEIGTSLSNTDDNWNFGLNDYNNDGLIDLYCIKRNGSGATEIHILNGKNNF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCC SSFNFESATPMEPTDKNTQFIVSNDGALNVYPIKKQGATSTEVHEFGTKSQDHDKNYNNS CCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCC SNLITFIGQYESFSPVPYRGADYQNRTIGYGHVIQPGENLSYLTDEQARDLLQRDIQNTT CCEEEEEECCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH NAVSSITSGLKLTQNQFDSLVDFAYNCGISALESSILLKNIKAGNTSADTLKTNFISWSY HHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEECEEEEEE CNGEELLGLWRRRMDEWQMYEYSDYNRDYPNW CCHHHHHHHHHHHHHHCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA