Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
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Accession | NC_001988 |
Length | 192,000 |
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Identifier: 15004778
GI number: 15004778
Start: 78578
End: 79096
Strand: Direct
Name: Not Available
Synonym: CA_P0074
Alternate gene names: NA
Gene position: 78578-79096 (Clockwise)
Preceding gene: 15004777
Following gene: 15004780
Centisome position: 40.93
GC content: 26.59
Gene sequence:
>519_bases GTGAGATATAAAATTGAAGACTTGGAAGATTTAACAGATGCTAAAAGTTTTATGAATGGCTATTTAGCTTCATGTTCATA TAAGTTTTTAAAATATATTATTTATATAATAATAGCTATTTTAGTTTGTATAGTAATATGGTCCTTATCTGCAGAAAAAT ATGTTACAGTAAATGCTTCTGGTGAAATAGATACTAAGAACAATGTCTGTAATATATATATTGAAAATACTAGTATAGGA AGCATAAATGAAAATAACAAAGTTCAGATTGAAATAGTATCTTTACCAAGAAACGAGTATGGTGTGTTAAAGTCTACAAT AAGTCGCGTAAGTCATGATGTAACAGTTGATCAAAATAGCGGCAGAAAATATTATACAGCTTCTTGTATTCTTCATAGTA ACGTTCTTAAAAGTAAAAATGGAGAAGCTGTAAAAGTAAAAAATGGAATGGAAGCTAAGGTTAGCATAATTACTTATAAA ACATCATATTTCAACTATATATTAGAAAAAGTAATGTGA
Upstream 100 bases:
>100_bases ATTAGATAAAGGCGGATATTATTATAGGTTATGGACTGAACAAACATTAGATGATGAAGAACAGAAAATAGTATCTAATT GTATATAGGAGGAAGCTAAA
Downstream 100 bases:
>100_bases TAGTTAGCTTTTTTAAATACAGCGGGAGCATTTAGTATAGATCAGAGGAGAATGTATATGTATTACATTCTCTAACTTTA TGAAGTGGTAATTAATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRYKIEDLEDLTDAKSFMNGYLASCSYKFLKYIIYIIIAILVCIVIWSLSAEKYVTVNASGEIDTKNNVCNIYIENTSIG SINENNKVQIEIVSLPRNEYGVLKSTISRVSHDVTVDQNSGRKYYTASCILHSNVLKSKNGEAVKVKNGMEAKVSIITYK TSYFNYILEKVM
Sequences:
>Translated_172_residues MRYKIEDLEDLTDAKSFMNGYLASCSYKFLKYIIYIIIAILVCIVIWSLSAEKYVTVNASGEIDTKNNVCNIYIENTSIG SINENNKVQIEIVSLPRNEYGVLKSTISRVSHDVTVDQNSGRKYYTASCILHSNVLKSKNGEAVKVKNGMEAKVSIITYK TSYFNYILEKVM >Mature_172_residues MRYKIEDLEDLTDAKSFMNGYLASCSYKFLKYIIYIIIAILVCIVIWSLSAEKYVTVNASGEIDTKNNVCNIYIENTSIG SINENNKVQIEIVSLPRNEYGVLKSTISRVSHDVTVDQNSGRKYYTASCILHSNVLKSKNGEAVKVKNGMEAKVSIITYK TSYFNYILEKVM
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19483; Mature: 19483
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYKIEDLEDLTDAKSFMNGYLASCSYKFLKYIIYIIIAILVCIVIWSLSAEKYVTVNAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GEIDTKNNVCNIYIENTSIGSINENNKVQIEIVSLPRNEYGVLKSTISRVSHDVTVDQNS CCEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCC GRKYYTASCILHSNVLKSKNGEAVKVKNGMEAKVSIITYKTSYFNYILEKVM CCEEEEEEEEEEHHHHHCCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MRYKIEDLEDLTDAKSFMNGYLASCSYKFLKYIIYIIIAILVCIVIWSLSAEKYVTVNAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GEIDTKNNVCNIYIENTSIGSINENNKVQIEIVSLPRNEYGVLKSTISRVSHDVTVDQNS CCEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCC GRKYYTASCILHSNVLKSKNGEAVKVKNGMEAKVSIITYKTSYFNYILEKVM CCEEEEEEEEEEHHHHHCCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA