Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496856
Identifier: 11496856
GI number: 11496856
Start: 25337
End: 26407
Strand: Reverse
Name: 11496856
Synonym: BBJ34
Alternate gene names: NA
Gene position: 26407-25337 (Counterclockwise)
Preceding gene: 11496858
Following gene: 11496854
Centisome position: 68.01
GC content: 32.31
Gene sequence:
>1071_bases ATGATAAAAGGCAATACGTTTATTTTAATATTAGTAACAACAATGTTTGTATCATGCAAATTCTATGGAAGTGATGATAC AAATAAAAAAAATACATCTCTAAATGGTGATACTAGAGAGATTGACAATATAGGTTCAGTCATTTTAGAACAAGACGGAA ACAAAAAAGGTGATACTACTGCTAGTAAAGTTGCTTTGGATCAAGTTACAGAACATGCTAATAGTGAACTTATGCTTAAT GATGACCCTGATTCTAGTATTAGTAAATACAACCAAGAAAATACTACTGGCAAATTAACCGAAGAAGATATGGATAAGCT TAAGGCTTTTTTTGTAAAAACTATAACATATCAAGGGATACTCAATTCTATTTATAACAAATATACACGCTCTTATAATA CCATTGCAACTTATTCTGGTTGTGCCAATTATAATAGTATTGGATGTTTTAGCGAGGGCCCTTCTGCAAGGCGTAGTCAA GCCCTTAACGACCTAGAAAAAAATAAACTAGATGAAGAGTATACTAAACTTAACCAAATGCTAAAGGAGACTACACAAGA TTATTGCCCCAAAGCTCTAGACAATGCAATTGAGGAATACAAGAGGGCTATAACAATAGCTAAAGAAGCTGAAGATAAAA TAAAAAAAATAACAAGCTTTACAATAGATGAAGGCAATAATAATGAGGAAAGAAAAGAAAATGTAGATAACTTAAAAAAA GTTAACAATATTCTTTCTATTTCCGAAAAGACCATAGAAACAGCTAGTGTGGCTTATGCCAATGCTTTTGCTGTTATAGT ATCTAGATTATCTTCTGCCGAATTTATTACAGCTGTTAATGAATTTAAGGATGCTACTGAAAAGTATGCTAATGGCAATA AAGGAGACCATGCTGTTGATGTTGTTGTGGGTGCTATTGCAGGCATAGCTTTTGATAATGAGAATAGATTTGAAAGAGCC AAAATGTTTGCTAATAAGGAAAAAGGTGCGGAGGTAGACAAAATGATTGCTGCCATTGAGAAGCTAAGAGCTACTTATAC TGCAGTTAAGCCTAAAAATAAAGATAAATAA
Upstream 100 bases:
>100_bases TTTCATTATACAGAATAAAGCAATATAATATATTTAATATATATTATCGCTTAAATTTATTTAAACTTAATAAATAAATT AAGGGGAGAATAAAAAAAGA
Downstream 100 bases:
>100_bases ATAATAAATGTAATAACTGGGAAAATACAGAGAATATTCTTAAGCATTTTCTATTGAGCTTTTTGTATACATAATTTATT TTGGTTATGTTTTATTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK
Sequences:
>Translated_356_residues MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK >Mature_356_residues MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39651; Mature: 39651
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTT CCCCCEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCH ASKVALDQVTEHANSELMLNDDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGI HHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQALNDLEKNKLDEEYTKLNQM HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH LKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH VVVGAIAGIAFDNENRFERAKMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK HHHHHHHHHEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTT CCCCCEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCH ASKVALDQVTEHANSELMLNDDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGI HHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQALNDLEKNKLDEEYTKLNQM HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH LKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH VVVGAIAGIAFDNENRFERAKMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK HHHHHHHHHEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA