Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496858
Identifier: 11496858
GI number: 11496858
Start: 26995
End: 28053
Strand: Reverse
Name: 11496858
Synonym: BBJ36
Alternate gene names: NA
Gene position: 28053-26995 (Counterclockwise)
Preceding gene: 11496859
Following gene: 11496856
Centisome position: 72.25
GC content: 33.14
Gene sequence:
>1059_bases ATGAAAAGGAAAAGCAATATATGTATTTCACTTCTAGTCACAATATTATTTGTGTCTTGCAAGTTTTTTGGAAATAAAAG CGCAAGTAAAGAAAAAGAAGAAACTTCTTTTTCTGATACTGCTAGCAAGATTAGTAAGTCGGGAACAGCTGCTTCTTCAG ACAAACAAGAAAAAAATACAAGTGATGTTACAGGTGACGCCAAAAAGCATACTAGTAGCCCTTACATGCTTGCTGATGCC CTTATTGTTAGTGATACTACTAATAGAGATAGAGATAAGCAAGAAAATAAAGATAAATTAAATGAAGAAGATAAAAAAAA GCTTAATGCTTTTTTTAGCACAACTAAAACATATCAATCTAGCCTAGATTCCATTTATAACAAATATACAGGCTATTATA ATACCATTGATACCTATGGCAGCTGTGATACGTATCGCATTGAGTGTTTTAGTGTAGGACCTTCTGAAAAACGTAAACAA GCTCTTGCTGATCTAGAGAAGTTAAAACTAGACGAAAAGTACACTCAGCTTAGCACAATGTTAAAGAGTGCTGTGCCTAG TTATTACAAAAAAAATTTAGATGATTCTATTGCACAGTATAAGGAAGCCATAAAGCAGGCTATTGAAGCTGAAAGTAAAA TAGAGACAGTAAAAGACTATGCAACAGCTCAAAGTGCTGCCGATGACGAAAAGAAAAGAAATATAGATAATTTAAAAATA GTTAGAGATGTTCTTCTTATTATTAAAAAAACTATTGAGAAAGCCAGCCGATCTTATGCTGATGCTTTTGCTATTGCAAC ATCTAGCTTATCTTGTAGCGAATTTAAGCAAGCTGTTAAAGAGTTTAATGATGCTGCTAAACAATATGCTAATGGAAATA AAGGAGACAATGCTGTCAATGTTATTGTAGGCACTATTTCTAGTATGCCTTATGTCAAATTTAAAGATGAGTTTGCAAGA GCAAAAATGTTTGCTCGTAATTATAGAGGAGACGAGGTAGACAAGATGATAAGAGCTATCGACAAGCTGTGTGATGTTTA TAAAAAAGTTGCGCTTTAG
Upstream 100 bases:
>100_bases GGCCAACTCTTTTCTCTCTTTAAAACACTTTGCCTCTATGCTTGCTTTATAATAAAATAATACTTGGATAATGAATAACT AAAAAAATAAGGAGGTATTA
Downstream 100 bases:
>100_bases AATAAAATAAAATTAGGGTTTTACACCAAAAACTATGTTCTGTAATATTCAATATAATTTTCTTTATCTATGATAGAAGA GTCTTTAAACAAAACATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL
Sequences:
>Translated_352_residues MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL >Mature_352_residues MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39540; Mature: 39540
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC SDVTGDAKKHTSSPYMLADALIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQS CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQALADLEKLKLDEKYTQLSTM HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VIVGTISSMPYVKFKDEFARAKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC SDVTGDAKKHTSSPYMLADALIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQS CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQALADLEKLKLDEKYTQLSTM HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VIVGTISSMPYVKFKDEFARAKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA