Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496858

Identifier: 11496858

GI number: 11496858

Start: 26995

End: 28053

Strand: Reverse

Name: 11496858

Synonym: BBJ36

Alternate gene names: NA

Gene position: 28053-26995 (Counterclockwise)

Preceding gene: 11496859

Following gene: 11496856

Centisome position: 72.25

GC content: 33.14

Gene sequence:

>1059_bases
ATGAAAAGGAAAAGCAATATATGTATTTCACTTCTAGTCACAATATTATTTGTGTCTTGCAAGTTTTTTGGAAATAAAAG
CGCAAGTAAAGAAAAAGAAGAAACTTCTTTTTCTGATACTGCTAGCAAGATTAGTAAGTCGGGAACAGCTGCTTCTTCAG
ACAAACAAGAAAAAAATACAAGTGATGTTACAGGTGACGCCAAAAAGCATACTAGTAGCCCTTACATGCTTGCTGATGCC
CTTATTGTTAGTGATACTACTAATAGAGATAGAGATAAGCAAGAAAATAAAGATAAATTAAATGAAGAAGATAAAAAAAA
GCTTAATGCTTTTTTTAGCACAACTAAAACATATCAATCTAGCCTAGATTCCATTTATAACAAATATACAGGCTATTATA
ATACCATTGATACCTATGGCAGCTGTGATACGTATCGCATTGAGTGTTTTAGTGTAGGACCTTCTGAAAAACGTAAACAA
GCTCTTGCTGATCTAGAGAAGTTAAAACTAGACGAAAAGTACACTCAGCTTAGCACAATGTTAAAGAGTGCTGTGCCTAG
TTATTACAAAAAAAATTTAGATGATTCTATTGCACAGTATAAGGAAGCCATAAAGCAGGCTATTGAAGCTGAAAGTAAAA
TAGAGACAGTAAAAGACTATGCAACAGCTCAAAGTGCTGCCGATGACGAAAAGAAAAGAAATATAGATAATTTAAAAATA
GTTAGAGATGTTCTTCTTATTATTAAAAAAACTATTGAGAAAGCCAGCCGATCTTATGCTGATGCTTTTGCTATTGCAAC
ATCTAGCTTATCTTGTAGCGAATTTAAGCAAGCTGTTAAAGAGTTTAATGATGCTGCTAAACAATATGCTAATGGAAATA
AAGGAGACAATGCTGTCAATGTTATTGTAGGCACTATTTCTAGTATGCCTTATGTCAAATTTAAAGATGAGTTTGCAAGA
GCAAAAATGTTTGCTCGTAATTATAGAGGAGACGAGGTAGACAAGATGATAAGAGCTATCGACAAGCTGTGTGATGTTTA
TAAAAAAGTTGCGCTTTAG

Upstream 100 bases:

>100_bases
GGCCAACTCTTTTCTCTCTTTAAAACACTTTGCCTCTATGCTTGCTTTATAATAAAATAATACTTGGATAATGAATAACT
AAAAAAATAAGGAGGTATTA

Downstream 100 bases:

>100_bases
AATAAAATAAAATTAGGGTTTTACACCAAAAACTATGTTCTGTAATATTCAATATAATTTTCTTTATCTATGATAGAAGA
GTCTTTAAACAAAACATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA
LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ
ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI
VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR
AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL

Sequences:

>Translated_352_residues
MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA
LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ
ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI
VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR
AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL
>Mature_352_residues
MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNTSDVTGDAKKHTSSPYMLADA
LIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQSSLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQ
ALADLEKLKLDEKYTQLSTMLKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI
VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVNVIVGTISSMPYVKFKDEFAR
AKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39540; Mature: 39540

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
SDVTGDAKKHTSSPYMLADALIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQS
CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQALADLEKLKLDEKYTQLSTM
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH
VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VIVGTISSMPYVKFKDEFARAKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRKSNICISLLVTILFVSCKFFGNKSASKEKEETSFSDTASKISKSGTAASSDKQEKNT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
SDVTGDAKKHTSSPYMLADALIVSDTTNRDRDKQENKDKLNEEDKKKLNAFFSTTKTYQS
CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SLDSIYNKYTGYYNTIDTYGSCDTYRIECFSVGPSEKRKQALADLEKLKLDEKYTQLSTM
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKSAVPSYYKKNLDDSIAQYKEAIKQAIEAESKIETVKDYATAQSAADDEKKRNIDNLKI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH
VRDVLLIIKKTIEKASRSYADAFAIATSSLSCSEFKQAVKEFNDAAKQYANGNKGDNAVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VIVGTISSMPYVKFKDEFARAKMFARNYRGDEVDKMIRAIDKLCDVYKKVAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA