Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496844

Identifier: 11496844

GI number: 11496844

Start: 4576

End: 5496

Strand: Direct

Name: 11496844

Synonym: BBJ08

Alternate gene names: NA

Gene position: 4576-5496 (Clockwise)

Preceding gene: 11496842

Following gene: 11496832

Centisome position: 11.79

GC content: 29.75

Gene sequence:

>921_bases
TTGTTTTTATATACATTGTTAACGATAGGATTGATATCTTGTAATCTAGATTCTAAATTGCCTAATAAAGAGCAAAAAAA
TAACAATGATATAAAAGAAACTTTGGGTAGTAGTGTTCAAGAAAATGCTCTTAATAATTTATATGGGAATCAAGAAGAAA
AAAAGGATTTTAAAAATTTTGAGGAATTGAAAGACGAGAGTTTAATTGCTCTCGCAAAATCCTTAGCATCCACAAGACCC
ACTACTGTAGGCAATATAGAGTCCGCAGTCCTCCCTGTAGGGCATGTAGTGTCTTTAGAGACATCTGCTAATAAGGTTAG
TATACCAACCATTTCAATTAAGCACAATCAAAAAAAAGAGATAAAAAAAGAAGATCTTTCCCCTTCTACTAAGGAAGAAA
AGAAAGCAGATAAAGCAATTAAAGATATAGAGAATCTTATTAGAGACTCTGGATTTCCCGAGTTAATTGAGAGTATGTAT
TCACTTAAACATGAATATACTTTAATAAGAAATAATTTCTATGATGTGATAACTAAAATTAGGAACAAAAAAACATCATT
AATAAAAAATGGTCGTAACAATAGAGATAAAATAAAGGAACTAACACAATTGCAAAATAATTTAAAGATAGTGGATGAAC
TTGATGAAATTATGGTTCACATTGATATTGCAGAACAAGAGATAAGATCTGCGGCTTTCTTTTTTAATGAAGCTAAGGAA
ATTTTAAAAGAAGGCATTATTAAAAGATTGGAAAGTGAAAATAAAGTGGCATCACAATTAGCTAGACAGGCTTTAAATAA
AGTAGAAGATGCTTTAAAGAGCTTAGAAGCTTCTTCTTCTAAAAGAGGTTTGGCCATGGGAAGAAGGAGAATTATAAAAG
AACTTATTGAAAATGCAAAGACTGTTTTAAGTAAATCTTAA

Upstream 100 bases:

>100_bases
TTCAAACAAAATGATATATAATATTAATTAAGAATTATTATTATTTATAATATATATTCTCAGTAAAGAGGAAAGGGGGA
TATTTTTATGCAAAAAAAAT

Downstream 100 bases:

>100_bases
AATGAATAAGAAAATATTTAAATATTAATATATTTAAATTAGAGCCTTCTTTAAAAGAAGGCTCTCTTATATTAGTAATC
AAGCATGGAATTATACTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP
TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY
SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE
ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS

Sequences:

>Translated_306_residues
MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP
TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY
SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE
ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS
>Mature_306_residues
MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP
TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY
SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE
ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34640; Mature: 34640

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH
EELKDESLIALAKSLASTRPTTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCEEEECCCCHHH
IKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMYSLKHEYTLIRNNFYDVITKI
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TVLSKS
HHHCCC
>Mature Secondary Structure
MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH
EELKDESLIALAKSLASTRPTTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCEEEECCCCHHH
IKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMYSLKHEYTLIRNNFYDVITKI
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TVLSKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA