Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496844
Identifier: 11496844
GI number: 11496844
Start: 4576
End: 5496
Strand: Direct
Name: 11496844
Synonym: BBJ08
Alternate gene names: NA
Gene position: 4576-5496 (Clockwise)
Preceding gene: 11496842
Following gene: 11496832
Centisome position: 11.79
GC content: 29.75
Gene sequence:
>921_bases TTGTTTTTATATACATTGTTAACGATAGGATTGATATCTTGTAATCTAGATTCTAAATTGCCTAATAAAGAGCAAAAAAA TAACAATGATATAAAAGAAACTTTGGGTAGTAGTGTTCAAGAAAATGCTCTTAATAATTTATATGGGAATCAAGAAGAAA AAAAGGATTTTAAAAATTTTGAGGAATTGAAAGACGAGAGTTTAATTGCTCTCGCAAAATCCTTAGCATCCACAAGACCC ACTACTGTAGGCAATATAGAGTCCGCAGTCCTCCCTGTAGGGCATGTAGTGTCTTTAGAGACATCTGCTAATAAGGTTAG TATACCAACCATTTCAATTAAGCACAATCAAAAAAAAGAGATAAAAAAAGAAGATCTTTCCCCTTCTACTAAGGAAGAAA AGAAAGCAGATAAAGCAATTAAAGATATAGAGAATCTTATTAGAGACTCTGGATTTCCCGAGTTAATTGAGAGTATGTAT TCACTTAAACATGAATATACTTTAATAAGAAATAATTTCTATGATGTGATAACTAAAATTAGGAACAAAAAAACATCATT AATAAAAAATGGTCGTAACAATAGAGATAAAATAAAGGAACTAACACAATTGCAAAATAATTTAAAGATAGTGGATGAAC TTGATGAAATTATGGTTCACATTGATATTGCAGAACAAGAGATAAGATCTGCGGCTTTCTTTTTTAATGAAGCTAAGGAA ATTTTAAAAGAAGGCATTATTAAAAGATTGGAAAGTGAAAATAAAGTGGCATCACAATTAGCTAGACAGGCTTTAAATAA AGTAGAAGATGCTTTAAAGAGCTTAGAAGCTTCTTCTTCTAAAAGAGGTTTGGCCATGGGAAGAAGGAGAATTATAAAAG AACTTATTGAAAATGCAAAGACTGTTTTAAGTAAATCTTAA
Upstream 100 bases:
>100_bases TTCAAACAAAATGATATATAATATTAATTAAGAATTATTATTATTTATAATATATATTCTCAGTAAAGAGGAAAGGGGGA TATTTTTATGCAAAAAAAAT
Downstream 100 bases:
>100_bases AATGAATAAGAAAATATTTAAATATTAATATATTTAAATTAGAGCCTTCTTTAAAAGAAGGCTCTCTTATATTAGTAATC AAGCATGGAATTATACTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS
Sequences:
>Translated_306_residues MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS >Mature_306_residues MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNFEELKDESLIALAKSLASTRP TTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKEIKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMY SLKHEYTLIRNNFYDVITKIRNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAKTVLSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34640; Mature: 34640
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNF CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH EELKDESLIALAKSLASTRPTTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCEEEECCCCHHH IKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMYSLKHEYTLIRNNFYDVITKI HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TVLSKS HHHCCC >Mature Secondary Structure MFLYTLLTIGLISCNLDSKLPNKEQKNNNDIKETLGSSVQENALNNLYGNQEEKKDFKNF CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH EELKDESLIALAKSLASTRPTTVGNIESAVLPVGHVVSLETSANKVSIPTISIKHNQKKE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCEEECCEEEECCCCHHH IKKEDLSPSTKEEKKADKAIKDIENLIRDSGFPELIESMYSLKHEYTLIRNNFYDVITKI HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNKKTSLIKNGRNNRDKIKELTQLQNNLKIVDELDEIMVHIDIAEQEIRSAAFFFNEAKE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKEGIIKRLESENKVASQLARQALNKVEDALKSLEASSSKRGLAMGRRRIIKELIENAK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TVLSKS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA