Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496832

Identifier: 11496832

GI number: 11496832

Start: 6089

End: 6862

Strand: Direct

Name: 11496832

Synonym: BBJ09

Alternate gene names: NA

Gene position: 6089-6862 (Clockwise)

Preceding gene: 11496844

Following gene: 11496845

Centisome position: 15.68

GC content: 28.55

Gene sequence:

>774_bases
ATGAAAAAATTAATAAAAATACTACTGTTAAGTTTATTTTTATTGCTCTCAATATCTTGTGTTCATGATAAACAAGAATT
ATCATCAAAATCTAATTTAAATAATCAAAAAGGATATTTAGATAATGAAGGCGCAAATTCAAATTACGAATCAAAAAAAC
AGAGCATATTAAGTGAGTTAAATCAGTTATTAAAGCAAACTACAAATTCACTAAAAGAAGCCAAAAATACAACAGATAAT
TTAAATGCATCAAATGAGGCAAATAAAGTTGTAGAAGCGGTTATAAATGCAGTTAATTTAATTTCATCTGCTGCAGATCA
AGTAAAAAGTGCAACAAAAAATATGCATGATTTAGCTCAAATGGCAGAAATAGATTTAGAAAAAATAAAGAACTCTAGTG
ATAAAGCAATATTTGCATCTAATCTTGCAAAAGAAGCATATAGCCTTACTAAAGCAGCAGAACAAAACATGCAAAAACTG
TATAAAGAGCAACAAAAAATATCAGAATCAGAATCAGAATCTGACTATTCTGATTCTGCTGAAATAAAACAAGCTAAAGA
GGCCGTAGAAATAGCTTGGAAAGCTACAGTAGAAGCAAAAGATAAGTTAATTGATGTAGAAAATACAGTCAAAGAGACAT
TGGATAAAATAAAGACAGAAACTACGAACAATACAAAGCTTGCAGATATAAAAGAAGCAGCAGAGTTAGTATTACAAATA
GCTAAGAATGCAAAGGAAATAGTACAAGAAGTTGTGGCCTTGTTAAATACTTAA

Upstream 100 bases:

>100_bases
AATTGATATTAAAATATAATTGATATTAAAATATAATTGATATTGAAATATAATTGATATTAAAATATAATTTAAGACAT
TATATTTAAGGAGTATAAAT

Downstream 100 bases:

>100_bases
ATAAATAAAAGATGGAAGTAAGGAAGGAAGAATAATTTTGTGCTGGCTTATCCTTCCTTTTCTATTAAATCTTTAATTAA
AAATGAAATCTACAGGATAA

Product: outer surface protein D (ospD)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN
LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL
YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI
AKNAKEIVQEVVALLNT

Sequences:

>Translated_257_residues
MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN
LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL
YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI
AKNAKEIVQEVVALLNT
>Mature_257_residues
MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN
LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL
YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI
AKNAKEIVQEVVALLNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28434; Mature: 28434

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AKNAKEIVQEVVALLNT
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AKNAKEIVQEVVALLNT
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA