Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496832
Identifier: 11496832
GI number: 11496832
Start: 6089
End: 6862
Strand: Direct
Name: 11496832
Synonym: BBJ09
Alternate gene names: NA
Gene position: 6089-6862 (Clockwise)
Preceding gene: 11496844
Following gene: 11496845
Centisome position: 15.68
GC content: 28.55
Gene sequence:
>774_bases ATGAAAAAATTAATAAAAATACTACTGTTAAGTTTATTTTTATTGCTCTCAATATCTTGTGTTCATGATAAACAAGAATT ATCATCAAAATCTAATTTAAATAATCAAAAAGGATATTTAGATAATGAAGGCGCAAATTCAAATTACGAATCAAAAAAAC AGAGCATATTAAGTGAGTTAAATCAGTTATTAAAGCAAACTACAAATTCACTAAAAGAAGCCAAAAATACAACAGATAAT TTAAATGCATCAAATGAGGCAAATAAAGTTGTAGAAGCGGTTATAAATGCAGTTAATTTAATTTCATCTGCTGCAGATCA AGTAAAAAGTGCAACAAAAAATATGCATGATTTAGCTCAAATGGCAGAAATAGATTTAGAAAAAATAAAGAACTCTAGTG ATAAAGCAATATTTGCATCTAATCTTGCAAAAGAAGCATATAGCCTTACTAAAGCAGCAGAACAAAACATGCAAAAACTG TATAAAGAGCAACAAAAAATATCAGAATCAGAATCAGAATCTGACTATTCTGATTCTGCTGAAATAAAACAAGCTAAAGA GGCCGTAGAAATAGCTTGGAAAGCTACAGTAGAAGCAAAAGATAAGTTAATTGATGTAGAAAATACAGTCAAAGAGACAT TGGATAAAATAAAGACAGAAACTACGAACAATACAAAGCTTGCAGATATAAAAGAAGCAGCAGAGTTAGTATTACAAATA GCTAAGAATGCAAAGGAAATAGTACAAGAAGTTGTGGCCTTGTTAAATACTTAA
Upstream 100 bases:
>100_bases AATTGATATTAAAATATAATTGATATTAAAATATAATTGATATTGAAATATAATTGATATTAAAATATAATTTAAGACAT TATATTTAAGGAGTATAAAT
Downstream 100 bases:
>100_bases ATAAATAAAAGATGGAAGTAAGGAAGGAAGAATAATTTTGTGCTGGCTTATCCTTCCTTTTCTATTAAATCTTTAATTAA AAATGAAATCTACAGGATAA
Product: outer surface protein D (ospD)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI AKNAKEIVQEVVALLNT
Sequences:
>Translated_257_residues MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI AKNAKEIVQEVVALLNT >Mature_257_residues MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDN LNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKL YKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI AKNAKEIVQEVVALLNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28434; Mature: 28434
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH NQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AKNAKEIVQEVVALLNT HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH NQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AKNAKEIVQEVVALLNT HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA