Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496836

Identifier: 11496836

GI number: 11496836

Start: 11862

End: 12452

Strand: Reverse

Name: 11496836

Synonym: BBJ18

Alternate gene names: NA

Gene position: 12452-11862 (Counterclockwise)

Preceding gene: 11496837

Following gene: 11496835

Centisome position: 32.07

GC content: 20.64

Gene sequence:

>591_bases
TTGAATGATTTACTAGAAAAACTAAAAGCGAGAAAAAAAGAAATAATAAGCAAGAAAGAAGCGGAATATAACAATAATAT
AAATAAAGGAACAAAAGAAAGAACTGCCTTTTTTAGAATTGAAGAAATAGATAATAAAAAAATATATTATACAAAAATCT
TTAAATATTTAGTAAAATTTAGAATTGCCAATAAAGACAATAAGCTAAGTTTAACTTTCCAAAAACTTAATAATAAAAAA
AATTATTATTTATTTAATCTTTTTCCTCTAAAAGAAGACAACAAGTTTCTAGGAATAAAATATGGATGGGACAAATTAGA
AAAGCCTTTTTTTTTAAGGCAAAATAATAAATCTTATGTAATAAAAAAACTTTATTATTTAGAATTTAAATTTAGCAAAG
GGTCTATTAAGTGTTACGTTCAGTCTCTTAGAACACTATTAAGAAAAAAAGACAAAGAAAGTACCAAATATTATAAGTTT
AATTTAGAACACATAAAAAGAATGGAAAATACCGTATATAAATTTTACAGTAAAAAGCTAAAAAATAAAGGAGTAATATA
TAAATGGATAGAAAAAAATCAAATATTATAA

Upstream 100 bases:

>100_bases
CATTCTAAATGGAAAACAAATAAAAAAACCAATTTTAGCGGACATGTAAAAGAAATAGCCAACAACATTCTAAGTAAAAT
TTTAGAAAAGGAGCTAAAGT

Downstream 100 bases:

>100_bases
CAATAGCAAATCTTAAGGGAGGTGTAGGCAAGAGCACACTATCAATACTGTTTTCTTATGTATTAAAGGATTTGGGTAAA
AAAGTATTGCTTATTGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEIDNKKIYYTKIFKYLVKFRIANKDNKLSLTFQKLNNKK
NYYLFNLFPLKEDNKFLGIKYGWDKLEKPFFLRQNNKSYVIKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKF
NLEHIKRMENTVYKFYSKKLKNKGVIYKWIEKNQIL

Sequences:

>Translated_196_residues
MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEIDNKKIYYTKIFKYLVKFRIANKDNKLSLTFQKLNNKK
NYYLFNLFPLKEDNKFLGIKYGWDKLEKPFFLRQNNKSYVIKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKF
NLEHIKRMENTVYKFYSKKLKNKGVIYKWIEKNQIL
>Mature_196_residues
MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEIDNKKIYYTKIFKYLVKFRIANKDNKLSLTFQKLNNKK
NYYLFNLFPLKEDNKFLGIKYGWDKLEKPFFLRQNNKSYVIKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKF
NLEHIKRMENTVYKFYSKKLKNKGVIYKWIEKNQIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24114; Mature: 24114

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEIDNKKIYYTKIFKYLVKF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCEEHHHHHHHHHHHH
RIANKDNKLSLTFQKLNNKKNYYLFNLFPLKEDNKFLGIKYGWDKLEKPFFLRQNNKSYV
HCCCCCCEEEEEEEHHCCCCCEEEEEEEEECCCCCEEEEEECHHHHCCCEEEEECCCCEE
IKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKFNLEHIKRMENTVYKFYSKKL
EEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
KNKGVIYKWIEKNQIL
CCCCCEEEEECCCCCC
>Mature Secondary Structure
MNDLLEKLKARKKEIISKKEAEYNNNINKGTKERTAFFRIEEIDNKKIYYTKIFKYLVKF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCEEHHHHHHHHHHHH
RIANKDNKLSLTFQKLNNKKNYYLFNLFPLKEDNKFLGIKYGWDKLEKPFFLRQNNKSYV
HCCCCCCEEEEEEEHHCCCCCEEEEEEEEECCCCCEEEEEECHHHHCCCEEEEECCCCEE
IKKLYYLEFKFSKGSIKCYVQSLRTLLRKKDKESTKYYKFNLEHIKRMENTVYKFYSKKL
EEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
KNKGVIYKWIEKNQIL
CCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA