Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is soj [H]
Identifier: 11496835
GI number: 11496835
Start: 11152
End: 11889
Strand: Reverse
Name: soj [H]
Synonym: BBJ17
Alternate gene names: 11496835
Gene position: 11889-11152 (Counterclockwise)
Preceding gene: 11496836
Following gene: 11496834
Centisome position: 30.62
GC content: 22.63
Gene sequence:
>738_bases ATGGATAGAAAAAAATCAAATATTATAACAATAGCAAATCTTAAGGGAGGTGTAGGCAAGAGCACACTATCAATACTGTT TTCTTATGTATTAAAGGATTTGGGTAAAAAAGTATTGCTTATTGATATGGATTCACAAAATGCTTTAACTTCATATTTTA GAAAATATGTTTTTAATTTTGATAAAAATAACATTTATAATTTATTAATAGGCAATGTTTATTTTGATCAATGTATAAGT AAAATCAACGATAATATTTTTATAATTCCATCACATCCTTTTCTTGATGAATTTAATGATAAAAATTTGGATAATAAGGA AAATTTATTGAGTTTTTGTTTAGACAAAAATGTTTTAGGCCATGATTTTGATTATATTTTTCTTGATACTCCCCCTAGTT TTAGTTTTATTTTAAAAAATGCATTAAATACTACAAATCACATTATTATTCCAGTTCAACCTGAAACATGGTCAATAGAA AGTTTGGAGATATTAATGAAAAAAATTACAGATAAAAGCTACAATATTTCTATTGTTGTAAATCAATTTATTAAAAACAG GAATATACTTAAAGAGGTTGAAGATGCTCTATATAAACGATATAGTAACTATATAAAAGGTAAAATTCATTATTATAATA GTATAAAGGTTTTTATAATTAACCGTTTGGAACCAGATATAAAGAGCAAATATTATAAAGAAGCAAAAGATGTATTAAAA AATATTTTAGATTTGTAA
Upstream 100 bases:
>100_bases CCAAATATTATAAGTTTAATTTAGAACACATAAAAAGAATGGAAAATACCGTATATAAATTTTACAGTAAAAAGCTAAAA AATAAAGGAGTAATATATAA
Downstream 100 bases:
>100_bases CATTTTTTTATATTCCCCCGGGGGAATATAAAAAAGGGAGTTTAAAATGAAAATAAAAGCCGAAAAAGATAAAGAAGCAT TATTTAGTAATCGTTTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMDSQNALTSYFRKYVFNFDKNNIYNLLIGNVYFDQCIS KINDNIFIIPSHPFLDEFNDKNLDNKENLLSFCLDKNVLGHDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIE SLEILMKKITDKSYNISIVVNQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVFIINRLEPDIKSKYYKEAKDVLK NILDL
Sequences:
>Translated_245_residues MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMDSQNALTSYFRKYVFNFDKNNIYNLLIGNVYFDQCIS KINDNIFIIPSHPFLDEFNDKNLDNKENLLSFCLDKNVLGHDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIE SLEILMKKITDKSYNISIVVNQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVFIINRLEPDIKSKYYKEAKDVLK NILDL >Mature_245_residues MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMDSQNALTSYFRKYVFNFDKNNIYNLLIGNVYFDQCIS KINDNIFIIPSHPFLDEFNDKNLDNKENLLSFCLDKNVLGHDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIE SLEILMKKITDKSYNISIVVNQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVFIINRLEPDIKSKYYKEAKDVLK NILDL
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28606; Mature: 28606
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMDSQNALTSYFRKYVFNF CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCC DKNNIYNLLIGNVYFDQCISKINDNIFIIPSHPFLDEFNDKNLDNKENLLSFCLDKNVLG CCCCEEEEEECHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHCCCCCC HDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIESLEILMKKITDKSYNISIVV CCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEE NQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVFIINRLEPDIKSKYYKEAKDVLK HHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH NILDL HHHCC >Mature Secondary Structure MDRKKSNIITIANLKGGVGKSTLSILFSYVLKDLGKKVLLIDMDSQNALTSYFRKYVFNF CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCC DKNNIYNLLIGNVYFDQCISKINDNIFIIPSHPFLDEFNDKNLDNKENLLSFCLDKNVLG CCCCEEEEEECHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCHHHHHHHHHCCCCCC HDFDYIFLDTPPSFSFILKNALNTTNHIIIPVQPETWSIESLEILMKKITDKSYNISIVV CCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEE NQFIKNRNILKEVEDALYKRYSNYIKGKIHYYNSIKVFIINRLEPDIKSKYYKEAKDVLK HHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH NILDL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]