Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496677
Identifier: 11496677
GI number: 11496677
Start: 13157
End: 13495
Strand: Reverse
Name: 11496677
Synonym: BBG16
Alternate gene names: NA
Gene position: 13495-13157 (Counterclockwise)
Preceding gene: 11496678
Following gene: 11496676
Centisome position: 45.34
GC content: 32.45
Gene sequence:
>339_bases ATGAGTGAACTTGACGATCTTATTATGTGGATCAATCTTACTAAGATAGAATCTTTACGAATTGAGTGCACTAATGAAGA CGGAAACATTAGTATCCCAGATCAAACAAAAGTGCAACTTTTTGAAGTACTAAGATATGCAAAATCTATTTTGGCCTTGT ACCAAATGGGAGTTGCTTACAATAATTGGCTTGTAATTTTGCTTGATGTTCTTTATTTAGAAGTTTTCAATATTAGGTGT AAAGGAGATCAAAAAGAGTGTAAATTTAAGTACTTGCTCTCTCAACTTGATTTCCTATTCCCTCGTATTGATTCTTGTCC CTTTCTTTATATTGGTTGA
Upstream 100 bases:
>100_bases CATTCATGCCTCAATGGAATCAGCAGGAATAATTCACTTTCAACCACAAGAAGTTATTGAAATTGAAGTTACAAAACCTA ATGGGTAACAAACTTAGCAA
Downstream 100 bases:
>100_bases CCAAAAGGATAACAAATGGAAATTGGAGAAAAAATAAGAAAATCTATATTTGATAATGCAAAAAGTTTCGTTGGTTTTAA AATCCGACAAAAGTCGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSELDDLIMWINLTKIESLRIECTNEDGNISIPDQTKVQLFEVLRYAKSILALYQMGVAYNNWLVILLDVLYLEVFNIRC KGDQKECKFKYLLSQLDFLFPRIDSCPFLYIG
Sequences:
>Translated_112_residues MSELDDLIMWINLTKIESLRIECTNEDGNISIPDQTKVQLFEVLRYAKSILALYQMGVAYNNWLVILLDVLYLEVFNIRC KGDQKECKFKYLLSQLDFLFPRIDSCPFLYIG >Mature_111_residues SELDDLIMWINLTKIESLRIECTNEDGNISIPDQTKVQLFEVLRYAKSILALYQMGVAYNNWLVILLDVLYLEVFNIRCK GDQKECKFKYLLSQLDFLFPRIDSCPFLYIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13166; Mature: 13034
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELDDLIMWINLTKIESLRIECTNEDGNISIPDQTKVQLFEVLRYAKSILALYQMGVAY CCCHHHHHHHHHHEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC NNWLVILLDVLYLEVFNIRCKGDQKECKFKYLLSQLDFLFPRIDSCPFLYIG CCHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure SELDDLIMWINLTKIESLRIECTNEDGNISIPDQTKVQLFEVLRYAKSILALYQMGVAY CCHHHHHHHHHHEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC NNWLVILLDVLYLEVFNIRCKGDQKECKFKYLLSQLDFLFPRIDSCPFLYIG CCHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA