Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496678
Identifier: 11496678
GI number: 11496678
Start: 13508
End: 14341
Strand: Reverse
Name: 11496678
Synonym: BBG17
Alternate gene names: NA
Gene position: 14341-13508 (Counterclockwise)
Preceding gene: 11496679
Following gene: 11496677
Centisome position: 48.18
GC content: 34.17
Gene sequence:
>834_bases TTGAGTAGAAGTATTTTTGCAGAAGCAAGTGGTAGTTACAGTGCAGATATAATACAACTTGCAAAAGGTGGCCTTTCCGA GCTTGTACCTTACAAGATGATAAGTAGAAATGATCTAAGACAAGGTTATTATATTGTCAAAAAAGCAACAGTTGACCACA ATGTCACAGCAACTTTTGGTGATCATAGCAATGAAATTGGAAAAAGTAGTATTTTCTTCAAAGAAATGGCTTACAAGATG CACGTATTTGATACAGTACAGCGAATTTCTCTAAAAGACCTAATGTACGGAACTATAACCGAAGACGAAGTAAAGGCTAA TCTAGAGCTTGGCCTTATGAAGGATGCATACCATTCTGTTATTTTTGGTAAAAAAAACATCAATATGGAAGGCATTGCAA ATCTAAAGGGCAGAAGTAAAGTTACTGTTGAAACACTTACTAATGGATATACGTTGTATGAAAAAGTAGCACTTGCAAAA CGTGAAGCAGAAAAACACATGGAAAAACTTGATGAGGGTTACCATCTTTTAGTTCCTCACAATTTTTCTCACCTTTTATT AGAGTTATACAGCGAACCTCAGTATGTAACAGTTAAAGAAGCACTTTTTAGAGATCATAAAGTGGTAACTTCGGTTTTCA AAGGATTGAAAAATCCTATACTTTATCAACCAAATCCAGAAGTTATGTTTGTTCCAATGTTGTCAGAAATATTCTTTAGA AAATTTGCATCATCAGACGGAGATTACATTCATGCCTCAATGGAATCAGCAGGAATAATTCACTTTCAACCACAAGAAGT TATTGAAATTGAAGTTACAAAACCTAATGGGTAA
Upstream 100 bases:
>100_bases GTAGTTTTGCTTGATGTTAATATTGGCCCTGAGTTTGAGTCTAATGGTAACAGAAAATTTGCATGAACGTAAAAATTTGT GAAAAAATAGGAGGTAGTTC
Downstream 100 bases:
>100_bases CAAACTTAGCAAATGAGTGAACTTGACGATCTTATTATGTGGATCAATCTTACTAAGATAGAATCTTTACGAATTGAGTG CACTAATGAAGACGGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSRSIFAEASGSYSADIIQLAKGGLSELVPYKMISRNDLRQGYYIVKKATVDHNVTATFGDHSNEIGKSSIFFKEMAYKM HVFDTVQRISLKDLMYGTITEDEVKANLELGLMKDAYHSVIFGKKNINMEGIANLKGRSKVTVETLTNGYTLYEKVALAK REAEKHMEKLDEGYHLLVPHNFSHLLLELYSEPQYVTVKEALFRDHKVVTSVFKGLKNPILYQPNPEVMFVPMLSEIFFR KFASSDGDYIHASMESAGIIHFQPQEVIEIEVTKPNG
Sequences:
>Translated_277_residues MSRSIFAEASGSYSADIIQLAKGGLSELVPYKMISRNDLRQGYYIVKKATVDHNVTATFGDHSNEIGKSSIFFKEMAYKM HVFDTVQRISLKDLMYGTITEDEVKANLELGLMKDAYHSVIFGKKNINMEGIANLKGRSKVTVETLTNGYTLYEKVALAK REAEKHMEKLDEGYHLLVPHNFSHLLLELYSEPQYVTVKEALFRDHKVVTSVFKGLKNPILYQPNPEVMFVPMLSEIFFR KFASSDGDYIHASMESAGIIHFQPQEVIEIEVTKPNG >Mature_276_residues SRSIFAEASGSYSADIIQLAKGGLSELVPYKMISRNDLRQGYYIVKKATVDHNVTATFGDHSNEIGKSSIFFKEMAYKMH VFDTVQRISLKDLMYGTITEDEVKANLELGLMKDAYHSVIFGKKNINMEGIANLKGRSKVTVETLTNGYTLYEKVALAKR EAEKHMEKLDEGYHLLVPHNFSHLLLELYSEPQYVTVKEALFRDHKVVTSVFKGLKNPILYQPNPEVMFVPMLSEIFFRK FASSDGDYIHASMESAGIIHFQPQEVIEIEVTKPNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31401; Mature: 31269
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSIFAEASGSYSADIIQLAKGGLSELVPYKMISRNDLRQGYYIVKKATVDHNVTATFG CCCCEEECCCCCCCHHHHHHHHCCHHHHCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEC DHSNEIGKSSIFFKEMAYKMHVFDTVQRISLKDLMYGTITEDEVKANLELGLMKDAYHSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEHHHHHHHH IFGKKNINMEGIANLKGRSKVTVETLTNGYTLYEKVALAKREAEKHMEKLDEGYHLLVPH EECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NFSHLLLELYSEPQYVTVKEALFRDHKVVTSVFKGLKNPILYQPNPEVMFVPMLSEIFFR CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHHHH KFASSDGDYIHASMESAGIIHFQPQEVIEIEVTKPNG HHHCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCC >Mature Secondary Structure SRSIFAEASGSYSADIIQLAKGGLSELVPYKMISRNDLRQGYYIVKKATVDHNVTATFG CCCEEECCCCCCCHHHHHHHHCCHHHHCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEC DHSNEIGKSSIFFKEMAYKMHVFDTVQRISLKDLMYGTITEDEVKANLELGLMKDAYHSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEHHHHHHHH IFGKKNINMEGIANLKGRSKVTVETLTNGYTLYEKVALAKREAEKHMEKLDEGYHLLVPH EECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NFSHLLLELYSEPQYVTVKEALFRDHKVVTSVFKGLKNPILYQPNPEVMFVPMLSEIFFR CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHHHH KFASSDGDYIHASMESAGIIHFQPQEVIEIEVTKPNG HHHCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA