Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
---|---|
Accession | NC_001852 |
Length | 29,766 |
Click here to switch to the map view.
The map label for this gene is 11496676
Identifier: 11496676
GI number: 11496676
Start: 12309
End: 12752
Strand: Reverse
Name: 11496676
Synonym: BBG14
Alternate gene names: NA
Gene position: 12752-12309 (Counterclockwise)
Preceding gene: 11496677
Following gene: 11496691
Centisome position: 42.84
GC content: 34.01
Gene sequence:
>444_bases ATGAAGCACATAGAAGAATTTGTCATTAATCTGAAAAAGAATTTGAAAACTTACTTGGCTACTTGTAAACAAACAACCAC AAAAGTATATTACAAGTCTGAAATGTTTGCATGTTCAAACTTAGACTTGCCATCAATTGTCTTTGCAGTAAAAAGTACTG GAGAAATTCTGAATCATTGCAAAAATTACTCGATGCTTTTGTGTCCAAAGTTCATAATTTACACAGAGTGTAGCATGCGT CCTACTTTAGGGCTTGAGATTGCAAATATAATTGTGGCGTTTCTAATGCTAAATTATTCGTTGAAGTATTTTAGCATTGA CGATTCCCAGGTTGAAGACGAAAATTCTGATGCAAGAATGGTAACATTGGTTGATTCAACATTGGGAATTAGGATAGATG GCGCTGATTACATTAATTGTCGTGGAGGTAAAAATGGCAATTGA
Upstream 100 bases:
>100_bases CAGCAGTACCCATTTGGCTATCTTTGAAGAAGAGAAAACCTAAAAACCAATATACAAACTGGACAAGCGATTTAGTAAAG GAGTCTGCAAAATTACTTAG
Downstream 100 bases:
>100_bases AAAATTGAGAATGCCGACTGGCGCAGTGCTAGTTACGGTCAATATTGAAAAATTCAAGTGGAATTTCAAGGGTTCAGACA TTAAAAATAATAATGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKHIEEFVINLKKNLKTYLATCKQTTTKVYYKSEMFACSNLDLPSIVFAVKSTGEILNHCKNYSMLLCPKFIIYTECSMR PTLGLEIANIIVAFLMLNYSLKYFSIDDSQVEDENSDARMVTLVDSTLGIRIDGADYINCRGGKNGN
Sequences:
>Translated_147_residues MKHIEEFVINLKKNLKTYLATCKQTTTKVYYKSEMFACSNLDLPSIVFAVKSTGEILNHCKNYSMLLCPKFIIYTECSMR PTLGLEIANIIVAFLMLNYSLKYFSIDDSQVEDENSDARMVTLVDSTLGIRIDGADYINCRGGKNGN >Mature_147_residues MKHIEEFVINLKKNLKTYLATCKQTTTKVYYKSEMFACSNLDLPSIVFAVKSTGEILNHCKNYSMLLCPKFIIYTECSMR PTLGLEIANIIVAFLMLNYSLKYFSIDDSQVEDENSDARMVTLVDSTLGIRIDGADYINCRGGKNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16634; Mature: 16634
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIEEFVINLKKNLKTYLATCKQTTTKVYYKSEMFACSNLDLPSIVFAVKSTGEILNHC CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHH KNYSMLLCPKFIIYTECSMRPTLGLEIANIIVAFLMLNYSLKYFSIDDSQVEDENSDARM CCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE VTLVDSTLGIRIDGADYINCRGGKNGN EEEEECCEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MKHIEEFVINLKKNLKTYLATCKQTTTKVYYKSEMFACSNLDLPSIVFAVKSTGEILNHC CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHH KNYSMLLCPKFIIYTECSMRPTLGLEIANIIVAFLMLNYSLKYFSIDDSQVEDENSDARM CCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE VTLVDSTLGIRIDGADYINCRGGKNGN EEEEECCEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA